Pseudomonas mediterranea: E3Z27_06915
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Entry
E3Z27_06915 CDS
T08284
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pmed
Pseudomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmed03009
]
E3Z27_06915
Enzymes [BR:
pmed01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
E3Z27_06915
Ribosome biogenesis [BR:
pmed03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
E3Z27_06915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QHA81435
LinkDB
All DBs
Position
complement(1568192..1568884)
Genome browser
AA seq
230 aa
AA seq
DB search
MRVDRFLSNLPRFNRQQVRLLLVARRVRIDGLVISDPHAQVREFSRVEVDDELLQAGRAA
RYFMLHKPAGCVSATRDPQHPTVLDWLDEPDKDDLHIAGRLDFNTTGLMLITNDGTWSRR
LTQPQTKLPKVYYVETEQTITAEYAVTFARGLYFAFEGLTTQPAELTLLGPKSARLSIVE
GRYHQVKRMFGHFDNKVLRLHRERMGPLVLDADLEPGQYRALSPEEVSLI
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcgaccgtttcctcagcaatctgccgcgtttcaatcgccaacaggtccggttg
ttgttggtagcgcgccgtgtgcgaatcgacggcctggtgatcagcgacccccacgcccag
gtccgtgagttcagccgtgtcgaagtcgacgacgaactgctgcaggcaggccgagcggca
cggtatttcatgctgcataaacctgccggctgcgtcagcgccacgcgcgatccgcagcat
cccaccgtgctcgattggctggacgaaccggacaaggacgacctgcacatcgccgggcgc
ctggatttcaacaccaccgggttgatgctgatcaccaatgacggcacctggtcacgacgc
ctgacccagccgcagaccaaactgcccaaggtctactacgtcgagaccgagcagaccatc
actgccgagtacgccgtcacgttcgcccgaggcctgtactttgccttcgaaggtctcacc
acccagcctgcggagttgacactgctgggcccgaagtcggcgcggctgagcatcgttgaa
ggacgctatcaccaggtcaagcgcatgttcggccacttcgacaacaaagtgttgcgcctg
caccgcgaacgcatggggccgcttgtgctggatgccgatctcgagccgggccaataccgc
gccttgagccctgaagaagtcagcctgatctga
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