Pseudomonas mediterranea: E3Z27_08245
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Entry
E3Z27_08245 CDS
T08284
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pmed
Pseudomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmed03032
]
E3Z27_08245 (gyrA)
03400 DNA repair and recombination proteins [BR:
pmed03400
]
E3Z27_08245 (gyrA)
Enzymes [BR:
pmed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
E3Z27_08245 (gyrA)
DNA replication proteins [BR:
pmed03032
]
Prokaryotic type
DNA Topoisomerases
E3Z27_08245 (gyrA)
DNA repair and recombination proteins [BR:
pmed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E3Z27_08245 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QHA81677
UniProt:
A0A6I6QET5
LinkDB
All DBs
Position
1867495..1870161
Genome browser
AA seq
888 aa
AA seq
DB search
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELSVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSTVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPWESSA
VMTMVERAGADSCRPENLDPQYGLRDGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILNSATRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEDR
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVEEYTEGHYIFMATANGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTAR
GVRGMRLPEGQKLISMLIPEEGSQILTASARGYGKRTAISEFPEYKRGGQGVIAMVSNER
NGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLASDETLVGLERV
QEPSEVEGEELEGEEDVAFDGTLGADVDDMAGDDQSLDAAADEEDPQE
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tatctcgactacgcaatgagcgtaatcgtcgggcgggcgctgccggatgcgcgcgatggc
ttgaagcccgtgcatcggcgcgtgttgttcgcgatgagcgagctgggcaacgacttcaac
aagccgtacaagaaatccgcccgtgtcgtcggtgacgtgatcggtaagtatcaccctcac
ggcgacactgccgtgtacgacaccatcgtccggatggcgcagccattttccctgcgctac
ctgctggtagacggccagggcaacttcggctccgtggacggcgacaacgccgcggccatg
cgatacaccgaagtgcgcatgaccaagctcgcccacgagctgctggccgacctgcacaag
gaaaccgtggactgggtgccgaactacgacggcaccgaaatgatcccggcggtcatgccg
acccgaatcccgaacctgttggtcaacggttccagcggtatcgccgtgggcatggcaacc
aacatcccgccgcacaacctcggtgaagtcatcgacggttgcctggccctcatcgacaac
cccgagctgagcgtcgatgagctgatgcaatacatcccgggtccggatttcccgaccgct
gcgatcatcaacggtcgcgccggcatcatcgaggcctatcgcaccggtcgcggccgcatc
tacatgcgcgcccgctcgacggtcgaggacatcgacaaggtcggtggccgccagcagatc
gtcatcaccgaactcccataccagctgaacaaggcccgtctgatcgagaagatcgccgag
ctggtcaaggagaagaagctcgaaggcatcaccgagctgcgggacgagtccgacaaggac
ggcatgcgcgtcgtgatcgagctgcgccgtggcgaagtgcctgaggtgatcctcaacaac
ctctatgcccagacccagctgcaaagcgtgttcggtatcaacattgtcgcgctgatcgac
ggccgtccgcggatcctgaacctcaaggacctgctggaagccttcgtgcgtcaccgtcgc
gaagtggtcacccgccgcaccgtgttcgaactgcgcaaggcccgtgagcgtggtcacatc
ctggaaggccaggccgttgccctgtcgaacatcgacccggtcatcgccctgatcaaggcc
tcgccgacgccgtcggaagccaaggaagcgctggtcagcacgccttgggaatccagtgcg
gtgatgaccatggtcgagcgtgccggcgccgattcctgccgtccggagaacctcgacccg
caatacggtctgcgcgacggcaagtacttcctgtccccggaacaggcgcaagccatcctg
gaactgcgcctgcaccgcctgaccggcctggagcacgagaagctgctggccgagtaccag
gagatcctcaaccagatcggcgagctgatccgcatcctcaacagcgccacgcgcctgatg
gaagtgatccgcgaagagctggaagtgatccgcgccgaatacggcgacgtgcgccgcacc
gagatcctcgatgcgcgcctggacctgaccctgggtgacatgatcccggaagaagatcgc
gtggtgaccatttcccacggcggctacgccaagacccagccactggccgcttaccaggcc
cagcgtcgcggtggcaaaggcaagtcggccaccggcgtcaaggacgaggactacatcgcc
cacctgctggttgccaacagccacaccacgctgctgctgttctccagcaagggcaaggtg
tactggctcaagacctacgagattccggaagcgtcccgcgctgcccgcggtcgtccgctg
gtcaacctgctgccgctggacgacggtgagtacatcaccaccatgttgccggtcgaggaa
tacaccgaaggccactacatcttcatggcgaccgccaacggcaccgtcaagaagaccccg
ctggaatccttcagtcgccagcgcagcgtgggcctgatcgccctggagctggacgagggc
gacgtgctgatttccgccgccatcaccgacggcgagcgtgaggtcatgctgttctccgac
ggtggcaaggtcacccgcttcaaggaatccgacgttcgcgccatgggccgtaccgcccgc
ggtgtgcgcggcatgcgcctgccggaaggccagaagctgatttccatgctgatccccgaa
gaaggcagccagatcctcaccgcttcggcgcgtggttatggcaagcgtaccgccatcagc
gaattccccgagtacaagcgtggcggccagggcgtgatcgccatggtcagcaacgagcgt
aacggtcgtctggtcggcgcggtccaggtgctcgatggcgaggagatcatgctgatctcc
gaccagggcaccctggtgcgtacgcgggtcgacgaagtgtcgagcctgggtcgtaacacc
cagggcgtgacgctgatcaagctggccagcgatgaaacgctggtgggacttgagcgggtc
caggaaccatcggaagtcgaaggcgaggagctggagggcgaggaggacgtggcgttcgac
ggtaccctgggtgccgatgtcgacgacatggccggcgacgatcaatcgctcgacgctgcc
gcagacgaagaagatccgcaggaataa
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