Pseudomonas mediterranea: E3Z27_08715
Help
Entry
E3Z27_08715 CDS
T08284
Name
(GenBank) response regulator
KO
K20973
two-component system, sensor histidine kinase SagS [EC:
2.7.13.3
]
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed02020
Two-component system
pmed02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E3Z27_08715
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
E3Z27_08715
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pmed01001
]
E3Z27_08715
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pmed02022
]
E3Z27_08715
Enzymes [BR:
pmed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
E3Z27_08715
Protein kinases [BR:
pmed01001
]
Histidine kinases
Other
E3Z27_08715
Two-component system [BR:
pmed02022
]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
E3Z27_08715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
HATPase_c_2
SMP_2
IFT57
HetE-N
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
QHA81765
LinkDB
All DBs
Position
complement(1965133..1967454)
Genome browser
AA seq
773 aa
AA seq
DB search
MDIRFTQRLSYKQARLTVLVGFVLGTLLSLMQIGIDYASEDASINREILSLLEISHNPAS
RIAYNIDAELAQELALGLLRSPAIIGAELVDNNNTVLANVKRPELQNSYRFISDFLFGAQ
RRFEDRLYLDHLPNESLGVLRLDVDTYAFGSRFLRRAEVTLLNGFARSLILTGLLLALFY
VMLTKPLVRVIRELSSRDPGSNEQSSLECPTGHQYDEIGVLVSVANQQFENISTEIQQRR
MAENRLTEYLAQLENIVSARTAELKAINARLSQSNEELEVARRTALDMAEARSAFLASMS
HEIRTPLNGLLGMIALSLDGPLTAEQQQQLSIAHDSGKVLVELLNDILDLSKFDAGQLEL
ERIPFDLGSLIEDTANLLSQNAAPSVELACLIDPQFPAQVLGDPTRVRQIVSNLLSNALK
FTRFGRVDVRLSAYEGGVRIEVCDTGIGIPQDAQARIFQPFTQAGAGITRQFGGTGLGLA
LTNNLCEAMQGRLTISSEAGFGSQFCADLPLPCHTPAAPVEPLRGNIVAITANSSGLAEL
LDMLLPGWGLDYLRRSVDDRLQGLKPDVLITDCPECLFNLRPTFNAPILLVTAYGSFMPS
EQAAALAPLLQQARPLARHALYQILRRALQSETTTINDTQIEALPPSRRARVLLVEDNPV
NQLVAKGMLVKLGCEVLVAAHGAEALDQLERSTFDLVLMDCNMPVMDGYEASRQIRRSGR
WPDLPIVALTANAMPEERERCRGAGMTDYLSKPFRREELAAMLDQWVPTTSAL
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggacatcagattcacccaacggctgtcttacaagcaggcccgactgaccgtcctggtg
ggcttcgtgctaggcaccttgctcagtctgatgcagatcggcatcgattatgccagcgaa
gacgcgtcgatcaaccgcgagatcctgtcgttgctggaaatcagccacaacccggcctcg
cgcatcgcctacaacatcgatgccgaattggcccaggagttggccctgggcctgctgcgc
tcgcccgccatcatcggcgccgagctggtcgacaacaacaataccgtgctggccaatgtc
aaacgccccgaactgcagaacagttaccgtttcatcagcgatttcctgtttggtgcccag
cgccggttcgaagaccgtctctacctggaccatctgcccaatgaatccctgggcgtgctg
cgactggacgtcgacacctatgctttcggcagtcgcttcctgcgtcgggccgaggtcacg
ttactcaacggcttcgcccgcagcctgatcctgaccggcctgttattggccttgttctac
gtgatgctgaccaaacccctggtgcgggtcatccgcgagctgagcagccgcgacccgggc
agtaatgaacagagcagcctggaatgccctaccggccatcaatacgacgaaatcggcgta
ctggtatcggtcgccaaccagcagttcgaaaatatctccaccgaaatccagcagcggcgc
atggccgaaaatcgcctgaccgaatacctggcgcagctggaaaacatcgtctcggctcgc
accgccgaactcaaggccatcaacgcccgcctcagccagtccaacgaagaactggaagtg
gccaggcgtactgccctggacatggccgaggcccgctccgcgttcctggccagcatgagc
catgaaatccgcacaccgctgaacggcctgctgggcatgatcgccctgtccctggacggc
cccctgaccgccgaacaacagcaacagctatcgatcgcccatgactccggcaaggtgttg
gtcgagctgctcaacgacatcctcgacctgtcgaaattcgatgccggccaactggaactc
gaacgcatcccgttcgatctcggttccctgatcgaagacacggccaacctgctttcgcag
aatgccgcccccagcgtcgagctggcctgcctgattgatccgcaattcccggcacaagtg
ctcggcgacccgacccgcgtgcgccagatcgtcagcaacctgttatccaatgccctcaaa
ttcacccgcttcggccgggtcgatgtgcgattgagcgcctatgaaggtggagtgcggatc
gaggtctgcgataccggcatcggcattcctcaggatgcccaggcaagaatcttccagccc
ttcacccaggccggcgccggcattacccgccagttcggtggcaccgggctgggcctggca
ctgaccaataacctctgcgaagccatgcagggccgcttgacgatcagctccgaagccggt
ttcggcagccagttctgcgccgacctgcccctgccctgccacacgccagcggcaccggtc
gaacccttgcgtggcaatatcgtcgccattaccgccaacagcagcggtctggccgagctg
ctggacatgctgctacccggttggggattggactacctgagacgttcggtggatgacagg
ttgcagggcctcaagcctgatgttctgatcaccgactgccccgagtgcctgttcaacttg
cggccaactttcaacgcaccgatcctgctcgtcaccgcctacggtagcttcatgcccagc
gaacaggccgccgccctggccccgctgcttcaacaggcccggccactggcgcgccatgcg
ctgtatcagatcctgcgtcgcgccctgcaaagcgagacgaccaccatcaatgacacgcag
atcgaagctctgccaccgtccaggcgcgcccgagtgctgctggtggaggacaatccggtc
aaccagttggtcgccaagggcatgctggtcaagctcggctgcgaagtgcttgtcgccgcc
catggcgccgaggccctggatcaactcgaacggagcactttcgacctggtgctgatggac
tgcaacatgccggtgatggacggctacgaagccagtcggcagattcgtcgcagcggtcgc
tggccggacctgccgattgtcgcgctgacggccaacgccatgcccgaggaacgggaacgc
tgccggggtgccggcatgactgattacctgtccaagccattccgccgcgaagaactggcg
gcgatgctggatcaatgggtaccgactacgtcagcgctttga
DBGET
integrated database retrieval system
