Pseudomonas mediterranea: E3Z27_09595
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Entry
E3Z27_09595 CDS
T08284
Name
(GenBank) ribonuclease
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
pmed
Pseudomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmed03016
]
E3Z27_09595
Enzymes [BR:
pmed01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
E3Z27_09595
Transfer RNA biogenesis [BR:
pmed03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
E3Z27_09595
Prokaryotic type
E3Z27_09595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_T2
S_4TM
DUF7182
Motif
Other DBs
NCBI-ProteinID:
QHA81923
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All DBs
Position
2168753..2169412
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AA seq
219 aa
AA seq
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MKQRFAIVVLLALALGGMGTGNARESRSARAESVAGVFDYYVLSLSWSPTFCLTHSGDAQ
CSGKGYGFVLHGLWPQYAKGGWPQSCEPRVALTAAEREKGLMLFPTRKLLEHEWSKHGTC
SGLGAMGFLEASDKALAEVKVPSQLQPPSSSYYFEAEEIARLFRQSNPGIPADGIAVICS
GPQLSEVRVCMDKALAFSSCGRGVKTQCRSGDIRVPPVR
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaacgttttgcgatagtcgtgctgctcgcgctcgcgttgggcggcatggggacg
ggcaacgcccgtgaatcacgcagtgcccgggcggagtccgtcgcgggggttttcgattat
tacgtgctctcgctgtcctggtcgccgacgttctgcctgactcattcgggcgatgcgcaa
tgttccggcaaaggctatggttttgtcctgcatggcctctggccgcagtacgcaaagggt
ggctggccgcaatcctgtgaaccgagggtggcgctgaccgctgccgagcgggaaaagggg
ctgatgttgtttccgacccgcaagttgctggagcatgagtggtccaagcacggcacttgc
agtggcctcggcgccatgggctttctggaggcgtccgacaaggcgctggcggaggtgaag
gtgccgtcgcagctgcaaccccccagttcttcgtattatttcgaagccgaggagatcgcc
cggttgttccggcaaagcaatcctgggattccggccgatggaattgctgtcatctgcagc
gggccgcaattgtcggaagtccgggtgtgcatggacaaggcgctggcgttttccagttgc
ggcaggggcgtcaagacgcaatgccggagcggagatatccgggtgccaccggtgcgctga
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