Pseudomonas mediterranea: E3Z27_09610
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Entry
E3Z27_09610 CDS
T08284
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E3Z27_09610 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmed03400
]
E3Z27_09610 (xth)
Enzymes [BR:
pmed01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
E3Z27_09610 (xth)
DNA repair and recombination proteins [BR:
pmed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
E3Z27_09610 (xth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
BstA_C
Motif
Other DBs
NCBI-ProteinID:
QHA81926
LinkDB
All DBs
Position
2174019..2174813
Genome browser
AA seq
264 aa
AA seq
DB search
MKKLRIATFNINGIRARLPNLLEWLEREKPDIVCLQELKALDRDFPAAELESVGYGAIWH
GQASWNGVAILARDAQPLESRRGLPGDEGDSHSRYLEAAVHGVLVGCLYLPNGNPQPGPK
FDYKLAWFERLIDYAQALQASDHPVVLAGDYNVVPTDMDIYNPRSWLKDALLQPESRECY
QRLLDQGWTDSLRHLYPDERIYTFWDYFRQHWQKNSGLRIDHLLLNPAASPYLSEAGVDA
WVRNQPHPSDHAPTWIRLASRKRR
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagctgcgcatcgcgactttcaatatcaacggtattcgcgcccggttgcccaac
ctgctggaatggctggagcgggagaaacccgacatcgtttgcctgcaggagctcaaggcg
ctcgacagggatttcccggcggccgaactggagtcggtgggttacggggcgatctggcac
ggccaggcctcctggaacggcgtggcgatactggcccgtgatgcgcaaccgctggagagc
cggcgcggcttgcccggcgatgagggcgacagccacagtcgctatctggaggcggccgtg
catggcgtgctggtcggttgtctctacctgcccaacggtaatccgcagccagggcccaag
ttcgattacaaactggcgtggttcgagcggttgatcgattacgcccaggcgttgcaggcc
agcgatcaccccgtggtgctggccggcgactacaacgtggtacccaccgacatggatatc
tacaacccgcgctcctggctcaaggacgcgctattgcagcccgaaagccgcgagtgctat
caacggttgctggaccagggctggacggattcgttgcgccatttgtatccggacgagcgg
atctacaccttctgggattatttccgccagcactggcagaaaaactccgggctgcgcatc
gatcacctgctgctcaacccggcggcaagcccctatctgagtgaggcaggcgtggacgcc
tgggtcaggaaccagccgcaccccagcgatcacgcccccacctggatccggctggcttca
cgcaagcggcgctga
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