Pseudomonas mediterranea: E3Z27_12495
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Entry
E3Z27_12495 CDS
T08284
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
pmed
Pseudomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmed03000
]
E3Z27_12495
Transcription factors [BR:
pmed03000
]
Prokaryotic type
Helix-turn-helix
LacI family
E3Z27_12495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBP1_XylR
Peripla_BP_3
HTH_18
HTH_AraC
Peripla_BP_4
Peripla_BP_1
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QHA85388
LinkDB
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Position
2852122..2853321
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AA seq
399 aa
AA seq
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MKTVPPVHRIALLFNGSKIYDRGIISGIGNYLSSTRASWDLFLEEDFLCRLKGIERWQGD
GIIADFDDPLIGEALAGIRLPVVAVGGSYQDERAYPKGIPYVATDNFALMKLAYEHLIEA
GLTRFACFSLPEAQANRWAQEREKAFRSLVQRDGLPAEVYRGMGTSAPLWDSAVEQQIAW
LQSLPKPIGIIAVSDARARQLLQACLTAGIAVPEQVALIGIDNDPLTRSLTRVPLSSVIQ
GTETMGRTAARLLHQMLHGMPSTGTQILIPPDAINVQASSLHQPLGNPYVMQALLFIRQY
ACQGIKTAQVAGYVGVSRSSLEAHFRKERGCSVHDEILRFRLAAAARGLERADLAIADIA
RNCGFKSAQYLHTVFRREFGCTPRQYQQEERDHFPENAP
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgtccctcccgtgcaccgcattgcgctgttgttcaacggcagcaagatctac
gaccgcggcatcatcagcggcatcggcaactacctgagcagcacccgagcgtcctgggac
ctgttcctggaggaggacttcctgtgccggctgaaggggatcgaacgctggcagggtgac
gggatcatcgccgacttcgatgacccgctgattggcgaagcgttggccgggatccgcttg
ccggtggtggcggtgggcggttcctatcaggatgagcgcgcttatcccaagggcattccc
tatgttgccaccgacaatttcgcgctgatgaagttggcctacgagcacctgatcgaagct
ggcctcacgcgcttcgcctgtttcagcctgcccgaagcacaggccaatcgctgggctcag
gagcgggagaaagccttccgttcgctggtgcaacgcgatggcttgccggccgaggtttat
cgcggcatgggcaccagcgcgccgctgtgggacagcgcggttgaacagcagatcgcctgg
ctgcagagcctgcccaagcccatcggcatcatcgccgtcagcgatgcccgcgcccgccaa
ctgctgcaagcctgtctgaccgccggcatcgccgtgccggaacaagtggcgctgatcggc
atcgacaacgaccctctgacccgcagcctgacccgagtgcccctgagctcggtgatccaa
ggcaccgaaaccatgggccgcactgccgcgcgattgctccatcagatgctgcacggtatg
ccgtccacgggtacgcagatactgataccacccgacgcgatcaacgtgcaggcctcgagc
ctgcatcaaccgttgggtaacccctacgtcatgcaggcgctgctgttcattcgtcaatac
gcttgccagggcatcaagaccgcgcaggtggcggggtatgtgggggtgtcgcggtcatcg
ctggaagcgcatttccgcaaggagcgagggtgcagcgtgcatgacgagatcttgcggttc
aggttggccgcggctgcccgtgggttggagagagcggatttggcgatcgctgacattgcc
cgcaattgtgggttcaagtcggcgcaatatctgcacacagtatttcgtcgggagtttggc
tgcacacccaggcagtatcagcaggaggagcgcgaccattttccggagaacgctccttga
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