Pseudomonas mediterranea: E3Z27_12805
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Entry
E3Z27_12805 CDS
T08284
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pmed
Pseudomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmed03400
]
E3Z27_12805
DNA repair and recombination proteins [BR:
pmed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E3Z27_12805
Archaeal homologous recombinant proteins
E3Z27_12805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
nSTAND3
MMR_HSR1
AAA_22
AAA_15
RsgA_GTPase
cobW
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QHA82490
UniProt:
A0A6I6Q5Z5
LinkDB
All DBs
Position
complement(2927477..2931118)
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFDIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGTVPR
LNNTGRDAKVPDADGEIATGDPRTLLRRGTGDGYAEVDFRGIDGRRYRARWEANRAREKA
GGKLQASRQSLRDLDNDQLLASQKGEYKAQLEAALGLNFEQFTRAVLLAQSEFSAFLKAD
DNDRSELLEKLTDTALYTRLGRRAFDKAKQAKESHKQLQDQATGVTPLPPEARAELDARF
NEAQQQLKTQQAQLKQLELQHTWLKDLRQLQDEHASAAEQLQQAEADWNALADERLKLTR
LEQLAPQRHQFIRQAELTRLLAPLAIQVQQLGQQQLDLNEQQAELEKGLAAAQQALVAAR
QQSTDNAPLLRQAFEQQNTLARLITEANQATERQAQAQLACMDGQRTVETLLEQQNQVAA
RLQRIASELEQSSHLAPLSEAWKAYRDRLQQLMLIGNRLNKGQAELAALEASATRAAEEL
VARRQELEVLYKEAGAEPEAVAEQIQLLGNLLQDNRKQQRAFEDLTRLWASQQELDKRGG
ELEQRQQQALQERDRLVREGGEAKAELAVAEQTLSVTRDLLTRQRLARSESVEQLRAQLQ
DGQPCPVCGSVEHPYHQPEALLQSLGRHDENEEANARKAVDQLNEKVIDLRAQYSGVMAQ
LKELKQQQEQLAAQQQELAPSLEAHPLSAQLMAQDSVRRDAWLAQQNTQLHQRITQDEQR
QAALLTLQQDAARLSQHLRNAETASQQASLHLSNQQQELDRDRQRLDDELSHFSSLLPTD
TLQALRTEPAATFMQLDQQIAQRLEQLEQQREELGEQLQRQQTLEKEQDRQQTRVQQLES
AQQQLNGLTEQQQACQQALTQLLGEHSSAEQWQQQLDQALEQSRTAEAAANQQLHELRNG
LVQLAAELKARQEQAQSLDAEHQALAAGIAQWRTSHPELDDAALEALLALDEQQVGQLRQ
RLLNSEKAIEQARVLLIEREQRLQNHQAQHNGNLSPEQLADTLTQLQQQFSTSEQRCAEL
RAEQAEDQRRQNANQALAQQIEQAYAEYQRWARLDALIGSATGDRFRKLAQAYNLDLLVH
HANVQLRQLVRRYRLKRGGSMLGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
QRQGNGLSTVEVK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcgcgatccgcctcaagaacctcgcctccctggccggtcctttcgacatc
gatttcaccgccgagcccctggccagcgccggtctgttcgccatcaccggccccaccggc
gcaggcaaaagcaccttgctcgacgccctgtgcctggcgttgttcggtaccgtgccgcgc
ctcaacaacaccggacgcgatgccaaggtgccggacgccgacggcgaaatcgccaccggt
gacccacgcacgttgttgcgccgtggcaccggcgatggctacgcggaggtggatttccgc
ggcatcgacgggcgccgttatcgcgcccgctgggaagccaatcgtgcccgggaaaaggcc
ggcggcaagttgcaggccagtcgccagagcctgcgggacctggacaatgaccaattgctg
gccagccagaaaggcgagtacaaggctcaactcgaagcggcgctgggcctgaacttcgag
cagttcacccgcgccgtgttgctggcccagagtgagttcagcgcctttctcaaggccgat
gacaacgaccgcagcgaactgctggaaaaactcaccgacaccgccctgtatacccgcctt
ggccgccgcgccttcgacaaggccaagcaggccaaggaaagccacaagcagctgcaggac
caggccaccggcgtcacgccgctgccccccgaggcccgggccgagctggacgcacgcttc
aacgaagcccagcaacagctcaagacccaacaggcgcaactcaagcagttggaactgcaa
cacacctggctcaaggacctgcgccagttgcaggacgaacacgccagcgccgccgaacaa
ctgcaacaagccgaggccgactggaacgccctggcggacgagcgcctgaagctgacccgc
ctggagcaactggcgccccagcgccatcagttcatccgccaggcggaactgacccggctc
ctggcaccgctggcgatccaggtccaacagctcggccaacagcaactcgacctgaatgaa
caacaggcagaactggaaaaaggcctcgccgcagcacaacaggcactggtcgccgcccgt
caacaaagcaccgacaacgcgccgttgctgcgccaggcctttgaacaacagaacaccctc
gcccgcctgatcacggaagccaatcaggccaccgagcgccaggcgcaggcacaactggcc
tgcatggacggtcaacgtaccgtcgagaccttgctcgaacagcaaaaccaggtggccgcg
cgcctgcagcgcatcgccagcgagcttgagcaaagcagccacctcgcgccgctgagcgaa
gcctggaaagcctaccgtgatcgcctccaacagttgatgctgatcggcaatcgcttgaac
aagggccaggccgaactcgcggcgctggaagccagcgccacccgcgccgccgaggaactg
gtggcccgtcggcaagaactcgaagtgctgtacaaggaggccggcgccgaacccgaagcc
gtcgccgaacagatccaattgctcggcaatttgctgcaagacaaccgcaagcaacaacgg
gccttcgaggacctcacgcggttatgggccagtcagcaggaactggacaaacgcggcggc
gagcttgaacaacgccagcaacaggcgttgcaggaacgcgatcgactggtgcgcgaaggc
ggcgaagccaaggccgagctggcggttgccgaacagaccctgagcgtgacccgtgacctg
ctgacgcggcaacggttggcccgcagcgaaagcgtcgaacagttgcgcgcgcagctacag
gacgggcagccttgtccggtgtgcggcagcgtcgagcatccttatcatcagcctgaagcc
ctgctgcaaagcctcgggcgccacgatgaaaacgaagaagccaacgcgcgcaaagccgtc
gaccagctcaatgaaaaagtcatcgacctgcgtgcgcaatacagcggggtcatggcccag
ctcaaggagttgaaacagcagcaggaacaactggcggcccagcaacaggaactggccccc
agccttgaagcccatccgctgtccgcgcaactgatggcccaggacagcgtcaggcgcgac
gcctggctggcccagcagaacacccaactgcaccagcgcatcacccaggacgaacaacgg
caagccgccctgctgaccctgcaacaggacgccgcccgcctgtcccagcatctgcgcaat
gctgaaacggcgagccaacaggcctcactgcacctgagcaatcagcagcaggaactggac
cgggatcgccagcgcctggacgacgaactgagccatttcagcagcctgttgccgacagac
accttgcaagccctgcgcaccgagcccgccgcaaccttcatgcagctcgaccagcagata
gcccaacgcctggagcaactggaacagcagcgtgaagaactcggcgaacagctccaacgc
cagcagaccctggaaaaggaacaggaccgtcaacagacccgcgtccagcagctggaatcg
gcgcaacagcaactcaacggcctgaccgaacagcagcaggcctgtcagcaggcactcacg
caattacttggcgaacacagcagcgccgaacaatggcagcagcaactcgaccaggccctg
gaacagtcgcgcactgccgaggcagcggccaatcaacagttgcacgaattacgcaacggc
ctggtgcaactggccgccgaactcaaagcccgacaggaacaggcacagtccctggacgct
gaacatcaggcactggccgccggtatcgctcaatggcgcacgtcccatcctgaactggac
gacgcagccctcgaagccttgctcgccctcgatgagcaacaggtcggccagttgcgccag
cgcttgctcaacagtgagaaagccatcgaacaggcccgcgtactgttgatcgagcgagaa
cagcggctacagaatcatcaggctcagcacaacggcaacctgtcacccgaacagctggcc
gacaccctcacccaactgcaacagcaattttccaccagcgaacaacgttgcgccgaactg
cgtgccgaacaggctgaagaccagcgccggcaaaacgccaaccaggcgctggcccagcag
atcgagcaggcctatgccgagtatcaacgctgggcccggttggatgcgctgatcggctcc
gccaccggtgaccgtttccgtaaactggcccaggcctacaacctcgacttgctggtgcat
cacgccaacgtccagttgcggcaactggtgcgccgctaccggctcaagcgcggcggcagc
atgctcgggctcctggtgctggatacggaaatgggcgatgaattgcgttcggtgcattca
ttgtcaggtggcgaaaccttcctggtctccctcgccctggcgctgggcctggcctcgatg
gcttccagtacgctgcggatcgagtcgctgttcatcgacgagggtttcggcagcctcgac
cccgagtcgctgcaactggcgatggacgctctcgatggcttgcaggctcagggccgcaag
gtcgcggtgatctcccacgtgcaggaaatgcacgaacggatcccggtgcagatccaggtg
cagcgtcaggggaatgggttgagtacggtggaggtcaagtaa
DBGET
integrated database retrieval system
