Pseudomonas mediterranea: E3Z27_12985
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Entry
E3Z27_12985 CDS
T08284
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E3Z27_12985
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmed02000
]
E3Z27_12985
Transporters [BR:
pmed02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
E3Z27_12985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
QHA82524
LinkDB
All DBs
Position
complement(2975536..2976561)
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AA seq
341 aa
AA seq
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MVLKKSAVAVLFAGLLGVASQAAMAAESVNFVSWGGTTQDAQKQAWADPFSKSTGITVVQ
DGPTDYGKLKAMVESGNVQWDVVDVEADFALRAAAEGLLEPLDFSVIQRDKIDPRFVSDH
GVGSFYFSFVLGYNEGKLGAGKPQDWSALFDTKTYPGKRALYKWPSPGVLELALLADGVP
QDKLYPLDLDRAFKKLDTIKKDIVWWGGGAQSQQLLASGEASLGQFWNGRIYALQQDGAP
VGVSWKQNLVMADILVVPKGSKNKAAAMKFLANSSSAKGQADFSNLTAYAPVNVDSVARL
DSVLAPNLPTAYAKDQITLDFAYWAKNGQDIATRWNEWLVK
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgaagaaaagtgcagttgccgttctttttgctggcttgctgggcgttgccagc
caagcggcgatggctgccgaaagcgtcaacttcgtcagctggggtggcacgacccaggat
gcacagaaacaggcctgggccgacccgttcagcaagagcaccggcatcaccgtggtccag
gatggcccgactgactacggcaagctcaaggccatggttgaaagcggcaacgtgcagtgg
gacgtggttgacgtcgaggctgactttgccttgcgcgccgccgccgaaggtctgctcgaa
ccgctggacttctcggtcatccagcgcgacaagatcgacccacgcttcgtttccgatcac
ggcgtaggctccttctacttctccttcgtcctcggctacaacgaaggcaagctcggcgcc
ggcaagccccaggactggtccgcgttgttcgacaccaagacctaccccggcaaacgcgcc
ctgtacaaatggccgagccccggcgtgcttgaattggccctgctggccgacggcgtccct
caggacaagctctatcccctggacctggaccgcgccttcaagaaactcgacaccatcaag
aaagacatcgtctggtggggcggcggcgcccagtcccagcaactgctcgcgtccggtgaa
gccagcctcggccagttctggaacggtcgcatctacgcactgcaacaagacggcgcgccg
gtgggcgtgagctggaaacagaacctggtcatggccgacatcctggtcgtgccgaagggc
tcgaagaacaaggccgccgccatgaagttcctggccaactccagcagtgccaagggccag
gccgacttctccaacctgaccgcttatgccccggtcaacgtcgatagcgtcgcacgcctg
gattcggtgctcgctcccaacctgccgaccgcctacgccaaggatcagatcacgcttgat
ttcgcgtactgggccaaaaacggtcaggacatcgcgacacggtggaacgaatggctggtc
aaatga
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