Pseudomonas mediterranea: E3Z27_14210
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Entry
E3Z27_14210 CDS
T08284
Name
(GenBank) LysR family transcriptional regulator
KO
K19338
LysR family transcriptional regulator, nitrogen assimilation regulatory protein
Organism
pmed
Pseudomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmed03000
]
E3Z27_14210
Transcription factors [BR:
pmed03000
]
Prokaryotic type
Helix-turn-helix
LysR family
E3Z27_14210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
QHA82745
LinkDB
All DBs
Position
complement(3276562..3277497)
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AA seq
311 aa
AA seq
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MDIRELRSFVKVAQCGGFSRAAKELFIAQPALSRQIAKLEEQLQVALFIRHGRGVQLTAA
GARLLERADVMLRYMEETADHVRNSAFEERGHLAVGLPPAIGTIVGPQLIRRFHERWPKA
SLHVLEGLSTSLQEWLLDGRIQVAVVYNQPLLEAFDVRPIFSERMVLVGPPRETPKSVRI
MGLADFPLILPGLPHSNRRLIEQVAAQNGLQLNVVFDVDSVSLTKRMVAEGMGYSILAHA
AVQEDIANGVLVGHAIERPGIRSTVSLTTLKDRRNSRLALSWEKILLETLEELVTVGAWK
EATLWLGRDGA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggacatacgagaactccgctcctttgtaaaagtcgctcagtgcggcggtttcagtcgc
gcggcgaaagaactcttcatcgctcagccggcgctgagtcggcagatcgccaagcttgaa
gaacagcttcaagtggcgctgttcattcgacatggccggggagtgcagctgaccgctgcg
ggggcgcgcttgcttgagcgggcggatgtcatgctgcgctacatggaagaaaccgccgac
catgtccgcaacagcgcattcgaggagcgcgggcacttggccgttggattgccgcctgcg
atcggtactatcgtcggaccgcagttgatccgtcgttttcacgagcgctggccaaaggcg
tcattgcatgtgctcgaaggcctgagcacatcgctgcaggagtggttgctggatggccgg
atccaggtcgccgtggtgtacaaccagccgttgctcgaggcctttgatgtcaggccgatt
ttcagcgaacggatggtgttggtcgggccgcctcgggaaacgccgaaatcggtgcgcatc
atgggcttggcggatttcccgttgatcctccccgggttgccccacagcaatcgacggctg
atcgaacaggtcgccgcgcagaacggccttcaattgaatgtcgtcttcgacgtggacagc
gtcagcctgaccaaacgcatggtggccgaaggcatgggctattcgattcttgcccatgcg
gcagtccaggaagacatcgccaatggcgtcctagtgggccatgcgattgaacgtcccggc
attcgctccacggtttcgctgaccacactcaaggaccgtaggaacagtcgcctggctttg
agttgggaaaaaatcctgctggagacgttggaagaactcgtgacggtaggtgcgtggaag
gaggccacactttggcttggccgagatggagcatga
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