Pseudomonas mediterranea: E3Z27_14580
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Entry
E3Z27_14580 CDS
T08284
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K04033
AraC family transcriptional regulator, ethanolamine operon transcriptional activator
Organism
pmed
Pseudomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmed03000
]
E3Z27_14580
Transcription factors [BR:
pmed03000
]
Prokaryotic type
Helix-turn-helix
AraC family
E3Z27_14580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_11
HTH_36
HTH_17
Pico_P1A
GntR
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QHA82814
LinkDB
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Position
complement(3368929..3369891)
Genome browser
AA seq
320 aa
AA seq
DB search
MRNIHINHFRDVHLHAATVQEWSQDYSQLTAGSAESTLMQLTTAHCHIFREQINQRVVQH
GVAPRGKMCFAVPINVPGAIRMQGREVDDSSLFFLHGGEEFMFHMPMGMELLSITFEREL
FEQALAQTASAKEISQLLRQPVIRVSTPHFAQARRRLLAIFSQALANEELDNVWEQELEQ
AMLGEMLQLMTDPACDKYQRTTSSTRSFIVEKCHRLTTAEMNNVPSVDELCQRLQVSRRT
VQNSFRAVAETTPLNYLRSVRLNGVRRTLMSTQASHLSIGDAAAQWGFYHLSHFAAEYQE
LFAELPSHTQRAAIPECALA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatatccacataaaccactttcgcgacgtccacctccacgccgctaccgtccag
gagtggagccaggactacagccagctgaccgccggttcggccgaaagtacgctcatgcag
ctgaccaccgcgcattgccacatctttcgcgagcagatcaaccagcgtgtcgtgcagcac
ggcgtggccccgcggggcaagatgtgcttcgcggtgccgatcaacgtcccgggcgcgatt
cggatgcaagggcgcgaggtggatgacagcagcctgttctttcttcacggtggcgaagag
ttcatgttccatatgccgatgggcatggaactgctgtccatcactttcgaacgggaattg
ttcgagcaggcgctggcacaaacggcttcggcaaaggaaatcagtcagctgctgcgtcaa
ccggtgatcagggtttccaccccgcacttcgcgcaggcgcgtcgtcgtttgctggcgata
ttctcccaggccctggcgaacgaagagctcgacaacgtgtgggagcaggaattggaacag
gccatgctcggcgaaatgctgcagctcatgaccgatccggcctgcgacaagtaccaacgc
accacaagctccacccgcagcttcatcgtcgagaaatgccaccgcctgaccactgccgaa
atgaacaacgtgcccagcgtggacgagttgtgccagcgcctccaggtgagtcggcgtacc
gtgcagaacagctttcgtgcggtggccgagacgacgccgctgaactacctgcgttccgtc
aggctcaatggcgtgcgccgcaccttgatgtccacccaggcgtcacatctctcgatcggc
gacgccgcggcccaatggggcttctatcacctcagccacttcgcggcggagtaccaggag
ctgttcgcggagctgccgtcccatacccagcgcgcagccattcccgagtgcgccctggcc
tga
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