Pseudomonas mediterranea: E3Z27_15905
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Entry
E3Z27_15905 CDS
T08284
Name
(GenBank) nitrite reductase
KO
K22225
siroheme decarboxylase [EC:
4.1.1.111
]
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed00860
Porphyrin metabolism
pmed01100
Metabolic pathways
pmed01110
Biosynthesis of secondary metabolites
pmed01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
E3Z27_15905
Enzymes [BR:
pmed01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.111 siroheme decarboxylase
E3Z27_15905
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AsnC_trans_reg2
NirdL-like_HTH
HTH_Crp_2
HTH_24
DUF4423
Crp
Motif
Other DBs
NCBI-ProteinID:
QHA83050
LinkDB
All DBs
Position
3670891..3671424
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AA seq
177 aa
AA seq
DB search
MSACISPSEPSRQAPPPLSETSLARRLVELTQEGLPLLEDPWAWLAEQLGLSVESTLDLL
KRLQAEGAIRRIAAVPNHYRLGYRHNGMTVWDVADADMSRLGSLLGAQPFVSHCYRRPRR
PGWRYNLFAMVHGRSREEIDSYRDHLRYLLGDACAADDMLVSSRILKKTGLRLMPGS
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcctgtatttccccgtctgaaccgtcgcggcaagcaccaccgccgttgagtgaa
acatccctggcacggcgactggtcgaactgacccaggaaggcctgccgctgctggaagac
ccatgggcctggctcgcggaacagttgggactgagcgtggagtccaccctcgacctgctc
aaacgcctgcaggccgaaggcgccatccgccgcatcgccgccgtgcccaaccactaccgc
ctgggctatcgccacaacggcatgaccgtctgggacgtcgctgacgccgatatgtcgcga
cttggttcgctgctgggtgcgcagcccttcgtcagccactgctaccgacgtccgcgcagg
cctggctggcgctacaacctgttcgccatggtccacggtcgcagccgtgaggaaatcgac
agctaccgcgaccatctgcgctacctgctgggagatgcctgtgccgccgacgacatgctg
gtgagcagccgcatcctgaagaaaaccggcctgcgcctgatgccaggcagttaa
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integrated database retrieval system
