Pseudomonas mediterranea: E3Z27_16460
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Entry
E3Z27_16460 CDS
T08284
Symbol
tssB
Name
(GenBank) type VI secretion system contractile sheath small subunit
KO
K11901
type VI secretion system protein ImpB
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
E3Z27_16460 (tssB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pmed02044
]
E3Z27_16460 (tssB)
Secretion system [BR:
pmed02044
]
Type VI secretion system
Imp/Vas secretion system core components
E3Z27_16460 (tssB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
T6SS_VipA
Motif
Other DBs
NCBI-ProteinID:
QHA83153
LinkDB
All DBs
Position
3912980..3913540
Genome browser
AA seq
186 aa
AA seq
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MAESTQHKLDRVRPPRVQITYDVEIGNAIEKKELPLVVGILADLSGKPLDPLPKLNERRF
TEIDRDNFNEVLASISPRATLQVNNTLSGDDSKLNIELNFRHIDDFDPVKVVEQVTPLRR
LFEARQRLRDLLTKLDGNDDLDKLLRDVIANTEGLQEIKSARPQDTPQELPTVAANDDPA
PAEPQA
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaagtacccagcacaagctcgacagagtccgtcctccccgcgtccagatcacc
tacgacgtggaaatcggcaatgccatcgaaaagaaagaattgccactggtcgtcggcatt
ctggccgacctctcgggcaagccactggacccgctgcccaagctcaacgagcggcgcttc
acagaaatcgaccgcgacaatttcaacgaggtgctcgcctcgatctccccccgcgccacg
ctccaggtgaacaacaccctcagcggcgacgacagcaagctcaacatcgaactcaacttc
cgccacatcgatgacttcgacccggtcaaggtcgtggagcaggtcacgccgttgcgccgc
ctgttcgaagcccgtcaacgcctgcgcgacctgctgaccaagctcgacggcaacgacgac
ctggacaagttgctgcgcgacgtgatcgccaacaccgaaggcctgcaagagatcaagtcg
gcccggccccaggacacaccgcaggagctgccgaccgtggccgccaacgatgatccggcc
ccggccgaaccacaggcctga
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