Pseudomonas mediterranea: E3Z27_18370
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Entry
E3Z27_18370 CDS
T08284
Name
(GenBank) GAF domain-containing protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pmed
Pseudomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmed03000
]
E3Z27_18370
Transcription factors [BR:
pmed03000
]
Prokaryotic type
Helix-turn-helix
Other families
E3Z27_18370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_30
AAA_5
HTH_20
nSTAND6
AAA
HTH_7
AAA_2
HTH_23
Mg_chelatase
HTH_22
AAA_3
HTH_11
HTH_AsnC-type
HTH_24
HTH_28
HTH_10
AAA_7
HTH_36
HTH_Tnp_1
HTH_1
nSTAND3
HTH_psq
Phage_CI_repr
PAS_7
Motif
Other DBs
NCBI-ProteinID:
QHA83509
LinkDB
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Position
4331706..4333556
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AA seq
616 aa
AA seq
DB search
MAAPAPALSHDAIIQASWSRCRAFGLNHQSAPTFDPLPAEGIAQLLESQHSLVQTTHQEV
LPYYENILSNSNCLIMLADNQGQVLTSWGTQRFIEPKLAHGFSAGASWMERCTGTNAIGT
ALACEQAVHIEHDEHFLKANRFMTGSAAPIFDAERKVIAVLDVSSDSYLPPSHTLGMVKM
MSQTVENRLILNLFRGEHFQLIFNTGLNNLDSQWAGLLIFDESGQVLSANRRADNLLGLS
LARVSIESLFKVSLLELLNQPDGLPFSLQAAGRNRFQCMLKRPNQVSIKPRVFTEPSPSP
APAPAAHAISLNTLHFGDSRVEKAVRQAERLLEKDIPLLIHGETGVGKEVFVKALHQASS
RCKQPFIAVNCAAIPAELVESELFGYEKGAFTGANQKGSIGLIRKADRGTLFLDEIGDMP
LPTQARLLRVLQERCVQPVGSAELFPVDIRIISATNRSLREQVQLGRFREDLYYRIGGLT
LELPPLRERSDKQALFKRLWEHHREPTQWAGLSREVQELFERHPWPGNLRQVSSVLQVAL
AMAEEQPIRPEHLPDDFFVDLEMDPVEAPEPLSVDLNDAEDLNRQLQAVGGNISHLARRL
GVSRNTLYKRLRQLEN
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaccagctcctgccttgtcccacgacgccatcatccaggcctcctggtcccgc
tgccgtgcctttggcctgaatcaccagagcgcgccgaccttcgatccattgcccgccgaa
ggcattgcccagctgctggaaagccagcattccctggtgcagaccacccaccaggaagtc
ctgccttactacgagaacatcctcagcaattccaattgcctgatcatgctggccgacaac
cagggacaggtgctgacctcctggggcacccagcgcttcatcgagccaaaactggcccac
ggcttcagcgccggggcgagctggatggagcgttgcaccggcaccaacgccatcggcacc
gcactggcctgcgagcaggcggtgcacatcgaacacgatgaacacttcctcaaggccaac
cgcttcatgaccggctccgccgcgccaatcttcgatgccgagcgcaaggtcatcgccgtg
ctggacgtgtccagcgacagctatctgccgccctcccacaccctgggcatggtcaagatg
atgagccagaccgtggagaaccggttgatcctcaacctgttccgcggtgaacacttccaa
ctgatcttcaacaccggtttgaacaacctcgacagccaatgggccggcctgctgattttc
gacgagagcggccaggtactctccgccaaccgccgggccgacaacctgctgggcctgagc
ctggcgcgggtgagcatcgaaagcctgttcaaggtttcgctgctggagctgctgaaccag
cccgacgggctgccgttttccctgcaagcagccgggcgcaatcgtttccagtgcatgctc
aagcgcccgaaccaggtgtcgatcaaaccacgcgtcttcaccgaaccatcgccctcgccc
gcccctgctcccgccgcccacgccatcagcctcaataccctgcattttggtgacagccgc
gtggaaaaggccgtgcgtcaggccgaacgcttgctggaaaaagacattccgttgttgatc
cacggcgaaaccggcgtcggcaaggaagtgttcgtcaaagccttgcaccaggccagctcc
cgctgcaagcagccgttcattgcggtcaactgcgcggcgatcccggccgagctggtggaa
tcggaattgttcggttacgaaaaaggcgccttcaccggcgccaaccagaaaggcagcatc
ggcctgatccgcaaggccgaccgcggtacattgttcctcgacgagatcggcgacatgccc
ctgccgacccaagcccgcttgctgcgggtgttgcaggagcgttgcgtgcaaccggtgggc
agcgccgagctgttcccggtggacatccgtatcatctccgccaccaaccgctcactgcgc
gaacaagtgcaactgggccgtttccgcgaagacctgtactaccgcatcggcggcctgacc
ctggaactgccgccgctacgcgaacgcagcgacaaacaggcattgttcaaacgcctgtgg
gaacatcatcgcgagccgacccaatgggccggcctcagccgcgaagtgcaggaactgttc
gagcgtcatccatggccgggcaacctgcggcaggtcagcagcgtgctgcaagtggccttg
gcgatggccgaggaacagccgatccgcccggaacacctgccggatgatttcttcgtggac
ttggagatggacccggtggaggcaccggagccgctgtcggtggacctgaacgatgccgag
gacctgaaccgccaattgcaggcggtcggcggaaacatctcgcacctggcacggcggctc
ggggtcagccgcaataccctgtacaaacgtctgcggcagcttgagaactga
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