Pseudomonas mediterranea: E3Z27_18885
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Entry
E3Z27_18885 CDS
T08284
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pmed
Pseudomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmed03016
]
E3Z27_18885 (truA)
Enzymes [BR:
pmed01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
E3Z27_18885 (truA)
Transfer RNA biogenesis [BR:
pmed03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E3Z27_18885 (truA)
Prokaryotic type
E3Z27_18885 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QHA85431
LinkDB
All DBs
Position
complement(4410251..4411075)
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AA seq
274 aa
AA seq
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MAADGFFRIALGVEYKGSRYRGWQRQASGVATVQETLENALSKVADSPVSLHCAGRTDAG
VHACGQVVHFDTQVERSMKAWVMGANINLPHDVSVSWAKVMPAHFHARFKAIARRYRYVI
YNDQIRPAHLNEEITWNHRPLDVERMAEAAQYLVGVHDFSAFRAGQCQAKSPIKELHHLR
VTRHGKMIVLDVRASAFLHHMVRNIAGVLMTIGAGERPVEWIKEVLDSRIRRSGGVTAHP
FGLYLVQVEYRDEFELPERYIGPHFLTGFSELDG
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgacggctttttccggatcgccttgggcgttgaatacaaaggctcgcgctat
cgcggctggcagcgccaggcctccggtgtcgcgaccgtgcaggaaacccttgaaaacgcg
ctgtccaaagtcgccgattcacccgtgtcgctgcactgtgccgggcgcaccgatgccggc
gtgcatgcctgcggccaggtggtgcatttcgacacccaggtcgagcgttcgatgaaggcc
tgggtcatgggggccaacatcaacctgccccatgacgtcagcgtcagctgggccaaagtg
atgccggcgcatttccatgcacgcttcaaggcgatcgcccggcgttatcgctatgtgatc
tacaacgaccagatccgcccggcgcacttgaacgaagaaatcacctggaaccaccgtccg
ctggacgtcgagcgtatggccgaagccgcgcagtacctggtcggggttcatgatttcagc
gcctttcgcgccggccagtgccaggccaagtcgccgatcaaggagctgcatcacctgcgt
gtgacccgtcacggcaagatgatcgtgctcgacgtccgcgccagtgcattcctgcaccac
atggtgcgcaacatcgccggcgtgctgatgaccatcggcgctggtgagcggccggtggag
tggatcaaggaagtgctcgacagccgcatccgccgctccggtggcgtgacggcgcacccg
tttggcttgtacctggtacaggttgaataccgcgatgagttcgaactgccggagcgttac
atcgggccacatttcctcaccggcttctcggaactcgacggctga
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