Pseudomonas mediterranea: E3Z27_18940
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Entry
E3Z27_18940 CDS
T08284
Name
(GenBank) tRNA dihydrouridine(16) synthase DusC
KO
K05541
tRNA-dihydrouridine synthase C [EC:1.-.-.-]
Organism
pmed
Pseudomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmed03016
]
E3Z27_18940
Transfer RNA biogenesis [BR:
pmed03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
E3Z27_18940
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
Motif
Other DBs
NCBI-ProteinID:
QHA83603
LinkDB
All DBs
Position
complement(4425907..4426866)
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AA seq
319 aa
AA seq
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MQIALAPMEGLVDNILRDVLTRVGGIDWCVTEFIRVNDRLLTPAYFHKLAPELLTGARTA
AGVPLRVQLLGSDPVCLAENAALACELGSEVVDLNFGCPAKTVNKSRGGAVLLKEPELLN
QIVEHVRRAVPKHIPVTAKMRLGFDSPDGALVCATALAEGGAEHIVVHARTKTDGYKPPA
HWEWIPRVQDVVKVPVFANGDIWSVEDWRRCREISGVEDIMLGRGLVSRPDLARQIAAAR
AGEEVVQMSWAELQPMLQDFWMQVVDQLTPRQAPGRLKQWLAMLTRNYPEAVELFTALRR
ETELDAVGRLLGVQRTEAA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattgccctggcgcccatggaggggttggtcgacaacatcctgcgggacgtcctg
acgcgcgtcggtggtatcgactggtgcgtgaccgagttcatccgtgtcaatgatcgcctg
cttacaccggcctatttccacaagctcgcccccgagttgctgaccggcgcccggaccgcc
gccggcgtgccgctgcgggtgcaattgctgggttccgacccggtgtgcctggcggaaaac
gcagcgctggcctgtgaattgggctcggaagtggtcgatctgaatttcggctgcccggcc
aagacggtgaacaagtcccgcggcggcgcggtgttgctcaaggaaccggaactgctcaac
cagatcgtcgaacacgtccgtcgcgcggtgccaaagcacatccccgtcacggccaagatg
cgcctgggcttcgacagtccggacggtgcgctggtctgcgccacggcactggccgaaggc
ggggcggagcacatcgtggtgcacgcgcggaccaagacggacggctacaagccgccggcc
cattgggagtggatcccccgggtgcaggacgtggtcaaggtgccggtgttcgccaatggg
gatatctggagcgtcgaagattggcgtcgttgccgtgaaatcagcggcgtcgaggacatc
atgctcggtcgcggcctggtctcccgcccggacctggcccggcagatcgccgccgcccgc
gccggtgaagaggtggtgcagatgtcctgggccgagctgcaaccgatgctccaggatttc
tggatgcaagtggtcgaccagctgacgccgcgccaggcgcccgggcgcctgaagcagtgg
ctggcgatgttgacccgcaattatcccgaagcggtcgagctgtttaccgcactgcgtcgg
gaaaccgagctcgacgccgtaggccgtttgctgggtgtgcagcgcaccgaagcggcctga
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