Pseudomonas mediterranea: E3Z27_19575
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Entry
E3Z27_19575 CDS
T08284
Symbol
dgoD
Name
(GenBank) galactonate dehydratase
KO
K01684
galactonate dehydratase [EC:
4.2.1.6
]
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed00052
Galactose metabolism
pmed01100
Metabolic pathways
pmed01120
Microbial metabolism in diverse environments
Module
pmed_M00552
D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
E3Z27_19575 (dgoD)
Enzymes [BR:
pmed01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.6 galactonate dehydratase
E3Z27_19575 (dgoD)
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Motif
Pfam:
MR_MLE_C
MR_MLE_N
Amidohydro_1
Motif
Other DBs
NCBI-ProteinID:
QHA83708
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Position
complement(4552003..4553151)
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AA seq
382 aa
AA seq
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MKITKLTTFIVPPRWCFLKVETDEGVTGWGEPVVEGRAHTVAAAVEELSDYLIGKDPRNI
EDIWTVLYRGGFYRGGAVHMSALAGIDQALWDIKGKALGVSVSDLLGGQVRDKIRVYSWI
GGDRPADTARAAKEAVGRGFTAVKMNGTEELQFLDTFEKVDLALANVAAVRDAVGPNVGI
GVDFHGRVHKPMAKVLMKELDPYKLMFIEEPVLSENYEALKELAPLTSTPIALGERLFSR
WDFKRVLSEGYVDIIQPDASHAGGITETRKIANMAEAYDVALALHCPLGPIALAACLQLD
AACYNAFIQEQSLGIHYNESNDLLDYVKDARVFDYDQGFVKIPNGPGLGIEINEEYVIER
AAVGHRWRNPIWRHADGSFAEW
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaccaaactgaccacttttatcgttccgccgcgctggtgcttcctcaaggtc
gaaaccgacgagggcgtgaccggttggggcgagccggtggtcgagggccgtgcccatacg
gtggcggccgccgtcgaggaattgtccgactacctgatcggcaaagacccacgcaatatc
gaggacatctggaccgtgctgtatcgcggcggcttctatcgcggtggcgccgtgcacatg
agcgccctggccggtatcgaccaggcgctgtgggacatcaagggcaaggccttgggcgtg
tcggtcagcgacctgctgggcggccaggtgcgcgacaagattcgcgtctactcctggatc
ggcggcgaccggccggcggacaccgcccgcgcagcgaaagaagccgtagggcgtggcttc
acggccgtgaagatgaacggcactgaagagctgcaatttctcgacaccttcgaaaaagtc
gacctggccctcgccaacgtggcagcggtgcgggacgcggtagggccgaacgtcggcatc
ggcgtggacttccacggccgggtccacaagccgatggccaaggtgctgatgaaggaactc
gacccgtacaagctgatgtttatcgaagagccggtgctcagcgaaaactacgaagccctc
aaggaactggcgccgctgaccagcacgccgattgccctcggcgagcgtctgttttcccgc
tgggatttcaagcgggtactcagcgaaggctacgtcgacatcattcagccggatgcgtcc
cacgccggtggcatcactgaaacccgcaagatcgccaacatggccgaggcctatgacgtg
gcgctggcgctgcactgcccgctgggcccgatcgccctggcggcatgcctgcaactggat
gcggcttgctacaacgcgttcatccaggagcagagcctgggcatccattacaacgagagc
aacgacctgctggattacgtcaaggatgcgcgggtgttcgactacgaccaaggcttcgtg
aagatccccaacggcccgggcctgggcatcgagatcaacgaggaatacgtcatcgaacgc
gccgccgtcggccaccgctggcgcaacccgatctggcgccatgccgatggcagttttgcc
gagtggtga
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