Pseudomonas mediterranea: E3Z27_20130
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Entry
E3Z27_20130 CDS
T08284
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed00020
Citrate cycle (TCA cycle)
pmed00190
Oxidative phosphorylation
pmed00650
Butanoate metabolism
pmed00720
Other carbon fixation pathways
pmed01100
Metabolic pathways
pmed01110
Biosynthesis of secondary metabolites
pmed01120
Microbial metabolism in diverse environments
pmed01200
Carbon metabolism
Module
pmed_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pmed_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pmed_M00149
Succinate dehydrogenase, prokaryotes
pmed_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
E3Z27_20130 (sdhB)
00650 Butanoate metabolism
E3Z27_20130 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
E3Z27_20130 (sdhB)
00720 Other carbon fixation pathways
E3Z27_20130 (sdhB)
Enzymes [BR:
pmed01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
E3Z27_20130 (sdhB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer4_7
Fer4_9
Fer4_2
Fer4
Motif
Other DBs
NCBI-ProteinID:
QHA83811
LinkDB
All DBs
Position
complement(4661924..4662628)
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AA seq
234 aa
AA seq
DB search
MLQVSVYRYNPDQDAAPFMQDFQVDTGGKDLMVLDVLALIKEQDEGFSYRRSCREGVCGS
DGMNINGKNGLACITPLSAVVKGNKLIVRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQN
DTPAPAIERLQSPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLAD
SRDTKTSERLAALDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHVRNMLLQNGV
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaagtcagtgtttatcgctacaaccctgatcaggacgctgcgccgttcatgcag
gatttccaggtcgataccggtggtaaggacctgatggtgctggacgtgctggccctgatc
aaggagcaggacgaaggtttctcctatcgtcgctcctgccgcgagggcgtttgcggctcc
gacggcatgaacatcaacggcaagaacggcctggcctgcatcacgccactgtcggccgtt
gtcaaaggcaacaagctgatcgttcgtccgctgccaggtttgccggttatccgtgacctg
gtcgtcgatatgagcatcttctacaagcaatatgagaaggtgaagccattcctgcagaac
gacacgccggctccggccatcgagcgtctgcagtccccggaagagcgtgagaagctcgac
ggtctgtacgagtgcatcctgtgcgcctgctgctcgacctcgtgcccatccttctggtgg
aacccggacaagttcctgggcccggccgccctgctgcaagcgtaccgcttcctggcagac
agccgtgacaccaagacgtccgagcgtctggccgcactggatgacccgttcagcgtattc
cgctgccgcgggatcatgaactgcgtcaacgtctgtccgaaaggcctgaacccgactaag
gccatcggtcacgtacgtaacatgctgctgcaaaacggcgtgtga
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