Pseudomonas mediterranea: E3Z27_20135
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Entry
E3Z27_20135 CDS
T08284
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed00020
Citrate cycle (TCA cycle)
pmed00190
Oxidative phosphorylation
pmed00650
Butanoate metabolism
pmed00720
Other carbon fixation pathways
pmed01100
Metabolic pathways
pmed01110
Biosynthesis of secondary metabolites
pmed01120
Microbial metabolism in diverse environments
pmed01200
Carbon metabolism
Module
pmed_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pmed_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pmed_M00149
Succinate dehydrogenase, prokaryotes
pmed_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
E3Z27_20135
00650 Butanoate metabolism
E3Z27_20135
09102 Energy metabolism
00190 Oxidative phosphorylation
E3Z27_20135
00720 Other carbon fixation pathways
E3Z27_20135
Enzymes [BR:
pmed01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
E3Z27_20135
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Pyr_redox_2
GIDA
Thi4
FAD_binding_3
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
QHA83812
LinkDB
All DBs
Position
complement(4662640..4664412)
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AA seq
590 aa
AA seq
DB search
MANIPTISFDAIIIGGGGAGMRAALQLAQGGHKTAVITKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGLPFSRTETGRIYQRP
FGGQSKDYGKGGQAARTCAASDRTGHALLHTLYQGNLKAGTTFLNEYYAVDLVKNQDGAF
VGVIAICIETGETTYIRSKATVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYAPNAKDLAGRDVVARSMVKEI
IAGNGCGPNGDHVMLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVVPTCHYMMG
GVATNIHGQAITQNAEGVDEIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEKALTDGIEYDDATEADINAALSRLNALNNRTDGEDVATLRRELQSCMQNYFGVFRTGE
YMQKGIAQLAELRERIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEVRKESRG
AHAREDYEDRDDENWLCHTLYFPGEKRVAKRAVNFSPKTVPTFEPKVRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctaacattccaacgatttctttcgacgccatcatcattggcggcggcggtgccggc
atgcgcgcagcgctgcaactggcacagggcggtcacaagactgccgtgatcaccaaggtc
ttcccgacccgttcgcacactgtttccgcccagggcggcatcacctgcgccatcgcttcg
gccgacccgaacgacgactggcgctggcacatgtacgataccgtcaagggttccgactac
atcggtgaccaggacgctatcgaatacatgtgtcaggaaggcccggccgcggtgttcgag
ctggaccacatgggcctgccgttctcccgtaccgaaaccggccgtatctaccagcgtcca
ttcggcggccagtccaaggactacggcaagggcggccaggctgcgcgtacctgtgcggca
tccgaccgtaccggccacgcgctgctgcacaccctgtaccagggcaacctgaaagccggt
accacgttcctgaacgagtactacgccgtagacctggtgaagaaccaggacggcgccttc
gtcggtgtgatcgcgatctgcatcgaaaccggcgaaaccacctacatccgctcgaaagcc
accgtgctggcgaccggcggtgcaggtcgtatctatgcgtccaccaccaacgccctgatc
aacaccggtgacggtgtcggcatggccctgcgtgctggcgtaccggtacaagacatcgaa
atgtggcagttccacccgaccggcatcgccggcgccggtgtactggtcaccgaaggttgc
cgcggtgaaggcggctacctgatcaacaagcacggcgagcgtttcatggagcgttatgct
ccgaacgccaaggaccttgccggtcgtgacgtcgtggcgcgttcgatggtcaaggaaatc
atcgccggtaacggctgtggcccgaatggcgaccacgtgatgctcaagctcgaccacctg
ggcgaggaagtgctgcacagccgcctgccaggcatctgcgagctgtcgaagaccttcgct
cacgtcgacccggtcgtcgcgccggttccagtggttccaacctgccactatatgatgggc
ggcgttgccaccaacattcacggccaggcgatcacccagaacgccgaaggcgtggacgaa
atcatccctggcctgttcgcagtgggtgaagtggcgtgcgtatcggttcacggtgccaac
cgcctgggcggcaactcgctgctcgacctggtggtcttcggtcgcgctgccggcctgcac
ctggaaaaggccctgaccgacggtatcgagtacgacgacgctaccgaagccgacatcaat
gcggccctgtcgcgcctgaacgcgctgaacaaccgcaccgatggcgaagacgtggccacc
ctgcgtcgcgagctgcaaagctgcatgcagaactacttcggtgtattccgtaccggcgaa
tacatgcagaagggtattgcccagctggcagaactgcgtgaacgaattgccaatgtgaag
atcaacgataagtcacaggcgttcaacactgctcgtatcgaagcgttggaactgcagaac
ctgctggaagtggccgaagccaccgccatcgccgcagaagtgcgtaaagagtcccgtggt
gcccacgcccgcgaagactacgaagaccgtgacgacgaaaactggctgtgccacaccttg
tacttcccgggtgaaaaacgcgtcgccaagcgtgccgtgaacttctcgccgaagactgtt
ccgactttcgaacctaaagtccggacttattaa
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