Pseudomonas mediterranea: E3Z27_20145
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Entry
E3Z27_20145 CDS
T08284
Symbol
sdhC
Name
(GenBank) succinate dehydrogenase, cytochrome b556 subunit
KO
K00241
succinate dehydrogenase cytochrome b subunit
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed00020
Citrate cycle (TCA cycle)
pmed00190
Oxidative phosphorylation
pmed00650
Butanoate metabolism
pmed00720
Other carbon fixation pathways
pmed01100
Metabolic pathways
pmed01110
Biosynthesis of secondary metabolites
pmed01120
Microbial metabolism in diverse environments
pmed01200
Carbon metabolism
Module
pmed_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pmed_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pmed_M00149
Succinate dehydrogenase, prokaryotes
pmed_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
E3Z27_20145 (sdhC)
00650 Butanoate metabolism
E3Z27_20145 (sdhC)
09102 Energy metabolism
00190 Oxidative phosphorylation
E3Z27_20145 (sdhC)
00720 Other carbon fixation pathways
E3Z27_20145 (sdhC)
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Gene cluster
GFIT
Motif
Pfam:
Sdh_cyt
Fumarate_red_D
DUF5644
Motif
Other DBs
NCBI-ProteinID:
QHA85438
LinkDB
All DBs
Position
complement(4664778..4665152)
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AA seq
124 aa
AA seq
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MKSQRPVNLDLRTIKLPVTAYTSILHRISGVILFVSLAIMLYALDKSLDSEEGFGQVKAC
LTSPLAKLVIWGILSALLYHLVAGVRHLIMDMGIGETLEGGKLGSKIVIAVSVVVIVLAG
VWIW
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaagccaacgacctgtaaacctagacctaaggaccatcaaactcccagtcactgct
tacacgtccattcttcaccgtatttccggtgtcatcctctttgtcagcctggccatcatg
ctctacgcattggacaagtcgctcgactcggaagaaggcttcggtcaggtgaaggcgtgt
ctgaccagtccgctagccaagctagtgatttggggcatcctgtccgccttgctgtatcac
ctggttgccggtgtgcgccacttgatcatggatatgggcatcggtgagacgctggaaggc
ggcaagctgggctcgaaaatcgttatcgccgtttccgtggtggtaatcgttctggcagga
gtctggatatggtaa
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