Pseudomonas mediterranea: E3Z27_20645
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Entry
E3Z27_20645 CDS
T08284
Name
(GenBank) outer membrane porin, OprD family
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed01501
beta-Lactam resistance
pmed02020
Two-component system
Module
pmed_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E3Z27_20645
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E3Z27_20645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmed02000
]
E3Z27_20645
01504 Antimicrobial resistance genes [BR:
pmed01504
]
E3Z27_20645
Transporters [BR:
pmed02000
]
Other transporters
Pores ion channels [TC:
1
]
E3Z27_20645
Antimicrobial resistance genes [BR:
pmed01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
E3Z27_20645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Cbm74
Motif
Other DBs
NCBI-ProteinID:
QHA83898
LinkDB
All DBs
Position
4764224..4765546
Genome browser
AA seq
440 aa
AA seq
DB search
MNNKIYHKGLAAGAVLVLMPTGICYANSQSESAGFLEDSHLNLLSRNHYWHQTGDLGTQR
DWTQGEMLDFNSGFTQGVVGFGIDAFAYGAIKLDGSGKRTGSVTLPVRDNGQPADSYSKA
GGSIKVQLSNTLRYGDLQPKVPVFATGSSKLLNQTATGWMLDSGELKDIVLSAGLFTSGT
SYLSTNRSGDLGLAFARVSTPQVGYIGGTYALSDQTSISFYGSRYENLMDQYYTNINQAI
ALSESQSLTLDFNLYRSLNSGEAKAGDINVTAASISAALATGPHTFALAFQRNDGDQPHD
YAAIGSVSPGVAAGVFSDGLYLANAAELSDFNAPNEQSVQLRYELDMQSFGVPGLTLTAK
HIRGTDIDGSKVNADSAYFGLYGKSEEERETDLIAQYIIPSGPAKALTTKLIQSWHSGDI
STGGRITRTRLIISYPFEFF
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaaaatctaccataaaggtttagctgcaggggccgtactagtactaatgcct
acaggcatttgttatgcaaactcccaatcggagtctgctggatttttagaagacagtcat
ctcaacctcctttcccgcaatcactattggcatcagactggcgatttgggtacacagcgt
gattggacacagggtgaaatgcttgatttcaactctggatttacccagggtgtggtgggc
ttcggcatcgatgctttcgcctatggagccataaagctcgacggaagcggcaaacggaca
ggctctgtgacgctccctgttcgcgacaacggtcagccggcggatagctatagtaaagcg
gggggcagcatcaaggttcaactgtccaataccctaagatacggtgacttacaaccaaaa
gttcctgtgttcgctaccggcagctctaagttactgaaccagaccgcaactggctggatg
ctcgatagcggagagctaaaggatatcgtcctatccgctggacttttcacctcaggtaca
agttacctttctaccaatcgaagcggcgatctcggactggctttcgcaagggtcagcacc
ccacaggtgggatatattggtggtacgtacgcgctcagtgatcagacatctatatcgttt
tatggctctcggtatgagaacctcatggatcagtattataccaatatcaaccaagctatc
gcattatccgaatcacaatcattaacgcttgactttaacttataccgcagcctcaactcg
ggagaagcaaaggcaggtgatattaatgtcacagcagcgtcaatttcagcagcacttgca
acgggtcctcacacattcgcactggcgtttcagcgcaatgatggtgaccagccccacgat
tacgcagcgataggaagcgtcagtcccggagtggcagcaggtgtttttagcgacggtcta
tacctagcaaacgccgctgaattgtcagactttaatgcaccaaatgagcagtcagttcag
cttcgctatgagctggacatgcaatcgtttggagtaccgggtttgactttgacagccaag
catattcgtgggacggacatcgacggcagtaaagttaacgcagactcagcttattttgga
ctttatgggaagtctgaagaagagcgggagaccgatttgattgctcagtatatcatcccg
agcggtccggctaaggcattgacgactaaattaatacaatcttggcactcaggcgacatc
agtacaggcggtaggatcactcgaactcgactgattatctcctacccatttgaatttttt
tga
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