Pseudomonas mediterranea: E3Z27_20885
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Entry
E3Z27_20885 CDS
T08284
Symbol
topB
Name
(GenBank) DNA topoisomerase III
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pmed
Pseudomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmed03032
]
E3Z27_20885 (topB)
Enzymes [BR:
pmed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
E3Z27_20885 (topB)
DNA replication proteins [BR:
pmed03032
]
Prokaryotic type
DNA Topoisomerases
E3Z27_20885 (topB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QHA83939
LinkDB
All DBs
Position
4820996..4822963
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AA seq
655 aa
AA seq
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MRLFLCEKPSQGRDIAKVLGATRRGEGCLLGIETAVTWCIGHLLEAAPPEAYGEQYKRWS
LEHLPIIPLEWKVEVKPKTATQFKVIKRLLKEASTVVIATDADREGEMIARELLELCKYR
GPIQRLWLSALNETSIRKALSSLKPDHETFPLYHSALARSRADWLIGMNLSRLFTLLGRQ
AGYDGVLSVGRVQTPTLRLVVDRDRAIASFIPVPYWQVEVQLSSREQQFLASWLPPSSGR
DEAGRCLQQGLAVKAVQAIKAGQVATVLSLQTEQLREAPPLPFDLSTLQEVCSRKLGLGV
QEVLNIAQALYETHKATTYPRSDCRYLPESMFNEVPAVLDALLKTDPALQPALDKLNRSL
RSRVWDDAKVTAHHGIIPTTAPTNLARMSEPERNVYELIRSHYLAQFLPHHEFDRTEVEL
ACCGQRLTTVGKQILVQGWKSLLYDTTEDEESAQKSQVLPVLQQGTPCNVIDAGLKAMRT
AAPKPLTEGGLIKAMKNVAKLVSDPRLKQKLRDTTGIGTEATRANIIKGLIDRGYLLKKK
RALMSSAAAHTLIEAVPAAVADPGMTAIWEQALDEIEAGRLPLDAFVAKQANWIAQLVEH
CGTLRLVVPTDNGPACPMCNDTMRKRKGKSGPFWSCARYPNCKGTLPIKNKAQRT
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttattcctttgcgagaaaccctctcaaggtcgagacatcgccaaagtactcgga
gccacccgtcgcggcgaaggctgcctgctcggtatcgaaacagccgtcacctggtgcatc
ggccacctactcgaagcagccccaccggaagcctatggcgaacaatacaaacgctggtcg
ctggagcatttgccgatcattcccttggagtggaaagtcgaggtcaagcccaaaactgct
acccaattcaaagtcatcaagcgcctcctaaaagaagcttccaccgtagtgatcgcgacc
gatgctgatcgcgaaggtgagatgatcgctcgcgaactgctggagctctgcaagtatcga
ggccccattcaaaggctctggttatccgctctcaatgagacctccatccgcaaggcattg
tcctcgctgaaacccgaccacgagaccttccccctataccattcagcccttgcccgcagc
cgcgctgactggttgatcggcatgaacctcagtcgcttgtttacccttctcggccggcaa
gcgggctacgatggtgtgctgtcggttggacgggtccagacaccgacattacgtctggtg
gttgatcgggatcgcgcaattgccagcttcatccccgtgccttactggcaggtggaggtg
cagctatcgtcgagagagcagcagttccttgcgtcgtggttaccaccaagctcggggcgg
gatgaggcaggtcgttgcctgcaacaagggcttgccgttaaggcagtccaggcgatcaaa
gcaggccaagttgccacggtgctctcgctgcagactgagcagcttcgcgaagcgccgccc
ctaccctttgacttgagcacgctgcaagaagtctgctcacgcaagctggggctcggcgtc
caagaggtgctgaatatcgcccaggccctgtacgaaacacacaaggccaccacctatccg
cgcagtgattgccgctatctgccagagagtatgttcaacgaggtgcccgcggtgctcgat
gccttgctcaaaacagatcccgcactgcaacccgccttagacaaactcaatcgatcattg
cgttcacgggtgtgggacgatgccaaggtcactgcgcatcacggcatcatccctaccacc
gcccccacgaatcttgcgcggatgtccgaaccggagcgcaacgtctacgaactgattcgc
agccattacctagcgcaattccttcctcaccatgaatttgatcgcaccgaagtcgaattg
gcgtgctgcggacagcggttgaccaccgtgggcaagcagatcctggtccagggttggaag
agcctgctctacgacaccacagaggatgaagaatccgctcaaaagtcccaggtactaccg
gttctgcaacagggcacgccgtgcaacgtgatagacgctggactcaaggccatgcgcacc
gcggctcccaaaccactcaccgagggcggtctgatcaaagccatgaaaaacgtggccaaa
ctggtcagcgatccacggctgaaacagaaacttcgagacaccaccggtatcggtaccgaa
gccacgcgggccaacatcatcaagggattgatcgaccgtggttatttgctgaagaaaaaa
cgcgccttgatgtcttcggccgcggctcatacgctgatcgaggcggtgcctgcagcggtc
gcagatccgggaatgacggcgatttgggagcaggccctggacgaaatcgaagccggacgc
ctacctcttgatgcgttcgtcgccaagcaagcgaactggattgcgcagctggtcgagcat
tgtggaacgcttagactggtagtgcctacggacaacgggccagcctgcccaatgtgcaac
gacacgatgcgcaagcgtaaggggaagtccggaccgttctggtcttgcgcccgttatcct
aactgcaagggcaccttgcccatcaaaaacaaggcccagcgcacctga
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