Pseudomonas mediterranea: E3Z27_21075
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Entry
E3Z27_21075 CDS
T08284
Name
(GenBank) AAA family ATPase
Organism
pmed
Pseudomonas mediterranea
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
NERD
Viral_helicase1
Pkinase
NAT10_TcmA_helicase
PK_Tyr_Ser-Thr
ABC1
APH
UvrD-helicase
AAA
AAA_16
nSTAND3
ATPase
AAA_35
NPHP3_N
AAA_25
AAA_7
AAA_5
DEAD
Motif
Other DBs
NCBI-ProteinID:
QHA83976
LinkDB
All DBs
Position
complement(4854393..4859282)
Genome browser
AA seq
1629 aa
AA seq
DB search
MKIDCISSDGIHASEKDALERMRQAFNASEFSQKWHGYAGFMMMDTTYRDREIDLVLLTH
DRLLIVELKKWRGKIEPMQDHWLRSGEDMGRSPVKVLADKWKILSSKIQARLSNPAKSVY
IDYRVVMCGSADFSAIPEDEKAFVLTLDQFLRIAKSGGYRQEFKDSRSGTPNQYVQTFTS
FFRGKDFKPSGFSFNNFQIVGEASFPHPDGLYKEYKSVKKDDHRHEALLRRWDFSALTGV
ADTVDERARIALREHKVLGFIHEQNEQLDGVVLQCPLSHPTRDDIDADFCELYRLPSRQL
RLNEFVHRHGHDLSFVERISLVKVLLSHFADLHDTGVAHRDVSDHSLWFERPSKVSISGF
LTAYFPEAGTVGPLRDNLRAGKALLPEDSEIGRGEVSDPFRRDVYLLGVAAYHLLFLRLP
RLDDGIFLWEPTEVSECDSNVSAWFEQALEMIPSERFANARAMLDALNSLSLESQSARGV
DLRVFEAYRSDLIPMVVYPLLENLKQGHSHLYKSSVGGRSVSVKVWYGRQPDPKRPEDTQ
QLQAFLEKARLLKTQPCSSLPEVIDFGISDAGTFLVQQWVDGQALDTATDSFSSGQQVLD
LCHQLVKATLHLHSLGLQHGDIHPGNIMLEGSALHFIDTIDMVSGSLTETHTPAYVPADY
ESIALDQRDCYAVAKMCGELLDRWPAWEDHDVGPVRLEIQRCLSRELRVYALDRIDDALD
LLLNPPCPNSGPQLAVQLRRLTASKPFQSDNGVYHIGVLAQSVRDPKSQPSVVISVAGVR
ARLQIMLKPTTLDFVNIRNQEMPHSQFVHTASQAVATLKADILFAPASADNVIELLKALQ
AIPDIKAAIELVRAQILGLDYLTATDDLYDEKGEELTSEGLRTEDLWRSILEAEEATLPE
VEVAGAVDRDIGRHRDKVRIPYTKEGEPLDYGPDNKVEALQEIHGELVRVGHVDIRETTQ
AILVLDNTRIRMQLNEGDRIKLRSQQDLSSFRRRRQAVTRILAREAVLPNLIDYFDPANC
PAPLELQPPPTDAELNAYNRYDDEGQLIFSLNLQQREAFAKLWAQGPLSLLQGPPGTGKT
SFIASFIHYAMSHGAQSILLTSQSHEAVNNAAEKVIELCQRTEMPLDVVRFGAEGMVSEQ
LLPHHSASILQAYRDLFRAEMRERVTALNRNLGLPNPFVTVWFDIEFHLGRLMREIDRLE
SKRAQTDPYGDAYKSLTQRISQRRERFRTLAEEKFFYTSFAEPPEVIDYLRSTAMAAHAV
TSLDAVSRLDQVIAISQEWVDRLGTLRGNFEEFLAKTRTLVCGTCVGMGRSQFGVANIKY
DWVVVDEAARATPGELAIAIQSARRVLLVGDHRQLPPHYTKQVVQRIAADLQWRDRSMLT
RSDFERAFESRYGRQVGATLRTQYRMAPPIGELVSACFYPIPLAPGRGAPIAWFDQLPEP
LRAVVTWIDTSEAGRESYDRPKNPGFDNSYEAREIIDLLRSICTSGNFIQELMQDSSEDE
KPIGVICMYAEQKKLLQRLLSEQDWATGYRRLIKIDTVDSYQGKENRIIIVSTTRNNRLY
DQGFLSSVERVNVAISRAMDRLFIIGAARMWRERNQEAPLGRVLAYIEQHRDGSAFAVVE
TSGITGGRS
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgattgcatcagcagtgacggtattcatgcatctgaaaaggatgcgctggag
cggatgcgccaagcattcaacgcatcagaatttagccaaaaatggcacggctacgccgga
ttcatgatgatggataccacctaccgagatcgtgaaattgatctggtgttgctaacccat
gaccgccttctcatagtcgaacttaagaagtggcgcggcaagatagaacccatgcaggat
cactggttgcgtagcggtgaggacatggggcgttcccccgttaaagtattggcggacaaa
tggaagatcctctcttctaagatccaggcaaggctttccaatcccgccaaatccgtctat
atcgactatcgggtggttatgtgcggtagcgcggacttttcagccatacctgaggacgag
aaagcgtttgttcttacgctcgatcagtttctgcgcatcgctaagtcgggcggttatcgt
caagagttcaaggactcgagaagcggcactccgaatcagtatgtgcagacgtttacatca
ttttttcgtggtaaagatttcaaaccttcaggtttttcattcaataattttcaaatcgta
ggagaggcgagctttccacatcctgatggcttgtataaagagtacaaatccgtcaaaaaa
gatgatcatcgacatgaggcattattgaggcgttgggacttttcagcgctgacgggtgtg
gctgacactgtagatgagcgtgcacgtatcgcgctacgtgagcataaagtactaggcttt
atacatgagcaaaacgagcagctcgatggtgtggtgctgcagtgccctctgtcccatccg
acgcgggacgatatcgatgctgacttttgcgagttatatcgattgccgtcacggcaactg
cgactcaatgagttcgttcatcggcatgggcatgatctttccttcgtagaacgtatttcg
cttgtcaaagtattgctctcgcactttgctgatctgcatgacactggcgttgctcaccgt
gatgtcagcgaccatagcctgtggtttgagcgaccttcaaaggtttctatttcgggcttc
ctgacggcctacttcccggaggcgggcacagtcggtccactgcgagacaatctgcgcgca
ggtaaggcattgctcccggaggattctgaaattggtcgaggtgaggttagcgaccctttc
cgacgagatgtttatctgctcggagtcgcagcataccatctcctttttcttcgtttgccg
cgcctagatgatgggatttttctatgggagccaacagaagtttccgaatgtgactccaat
gtatccgcttggttcgagcaggcactggagatgattccttcagagcgattcgcgaatgcc
cgtgccatgcttgacgcgttgaattctctatcgttagagagccaatcagctagaggtgtt
gatctccgagtcttcgaagcctatcgaagtgatttgataccgatggttgtttaccctcta
ttggagaacttaaaacaaggccatagtcacctttacaaatcatccgtgggagggcgatct
gtctctgttaaggtttggtatgggcgtcagcctgatccaaagcgccccgaagatacgcag
cagttgcaggcgtttttggaaaaagcgcgactattgaaaacgcagccgtgctcttcactt
ccagaagtgatcgattttggtatttcggatgcgggaaccttccttgtacagcaatgggtg
gatggacaagcactggatacagcgactgattcgttctcgtcgggccagcaagtccttgac
ctatgccatcagctagtgaaagccacgctgcatttacacagcttgggtcttcagcatggg
gatatccatcccggaaacattatgctggaggggagtgcgttgcactttatcgataccatc
gacatggtgtcgggcagcctaactgagacccacacccctgcttacgttccggcggattat
gagtctatcgctctcgatcagcgtgattgttacgcagtggccaagatgtgtggtgagttg
cttgaccgttggcctgcatgggaagaccacgatgtggggccagtgcgcttggagattcag
cgctgtctgagccgagaactacgggtgtatgccctcgatcgcatcgacgatgcattagac
ttattgctaaatccaccgtgccccaattccggaccgcaattggccgtccaactgcgtcga
cttaccgccagcaaacctttccaaagtgataacggggtatatcacattggggtgttggct
cagagtgtacgcgatccgaagagtcagccgagcgtcgtaatatcggtggccggtgtgcgc
gcacgtctgcagattatgcttaagcctacaacgctcgacttcgtgaatatacgcaaccaa
gagatgccgcacagccagtttgtccacactgcttcccaggccgtggcaaccctgaaggct
gacatcctgttcgcgccggcgtctgcggacaacgtaattgagcttttaaaggcgcttcaa
gcaattccagatatcaaggcggccatagaactggttcgcgcccagattttagggttggat
tacctaacggctaccgacgacctttatgacgaaaaaggggaggagcttacgagtgaaggc
ctgcgcactgaagacctctggcgatccatccttgaagctgaagaggcaaccctgccagag
gttgaagtcgcaggagcggtagatcgcgatataggacggcaccgcgataaggttcgtatt
ccttacaccaaagaaggtgagcccttagactatggacctgataacaaggtagaagcgctg
caggagattcatggtgaattggtccgcgtggggcatgtcgatattcgtgagacaactcag
gccatacttgtactcgacaatacccgcattcgtatgcagttgaatgagggagatagaatc
aagctacgcagccagcaagacctgtcatcttttcggcgccggcgccaggccgtcacgcgt
atcttggctcgcgaagcagttcttccgaatctcatcgactatttcgatccggcgaactgt
cccgctccactggagctgcagcctcccccgacagatgcagaacttaacgcctacaaccgt
tacgacgatgaaggtcaattaattttttctctgaacctgcaacagcgtgaggctttcgct
aagctttgggcacaaggccctctgagcttgttgcaaggtcccccaggaacagggaaaact
tcttttatcgcgtcattcattcactatgccatgtcacatggcgcccagagcatactgctg
acaagccaatctcacgaagcggtcaacaacgcagcggaaaaggttatcgaactatgccag
cgcacagaaatgccactagatgtcgttcggttcggggcggagggcatggtatcggaacag
ttgctacctcaccattcggcttcaattctgcaggcctaccgagacctatttcgggctgaa
atgcgcgagcgcgtcactgcgcttaaccgcaatctggggctaccaaacccgtttgtgact
gtatggtttgacattgagtttcatctcggacgtctcatgcgggagatcgaccggttagaa
tcaaaaagggcgcaaactgatccctatggtgatgcttacaaatcgctgacccagcgtata
tctcagcgtagagaacgttttcgaactctggcagaagagaagtttttttatactagtttt
gcagagccacctgaggtcatcgattaccttcggagcactgcaatggctgcccacgctgtg
acgtcgcttgacgcagtctcccgattggatcaggtgatcgcgatttctcaagagtgggta
gatcgtttgggaacgcttcgaggtaatttcgaggagtttctggctaagacacgcacgctc
gtatgtggtacctgtgttgggatgggccgttcacaattcggcgtggcgaacatcaaatat
gactgggtcgttgtggacgaggccgcacgcgccacaccaggcgaattggctattgcaatt
cagtctgcacggcgagttttgctggtgggggatcatcgacaattaccaccacactatacc
aagcaagttgtgcagaggattgcagcagacttgcaatggcgggatcgctccatgctgacc
cgtagtgacttcgagcgcgcttttgagtccagatacggacggcaagtcggtgcgaccctg
cgcacacaataccgaatggcaccgcctattggtgagttagtctcggcttgcttctaccct
ataccgttggcgccaggtcgtggtgctcccatagcttggtttgatcaattgcctgaaccc
ctccgcgcagtcgtaacctggatagatacttctgaggccgggcgcgaatcttacgaccgt
ccgaagaatccaggcttcgacaactcttatgaagcacgcgagataattgatctgttgcgt
tcgatatgcaccagtgggaactttattcaagaattgatgcaggacagctctgaggatgag
aaacctatcggtgtgatttgcatgtacgccgaacagaaaaagttgctccagcggctccta
agtgaacaggattgggcgaccggttaccgcaggctgatcaaaatagacacagtcgacagt
tatcaaggcaaagagaatcgaataattattgtatccaccacgcgtaacaatagattgtac
gaccaaggtttcctgagcagtgttgagcgcgtaaacgttgctatttcacgcgcgatggat
cggttgtttatcatcggtgcagcaaggatgtggcgcgagcggaatcaggaggcacccttg
gggcgggttctcgcctacatcgaacagcatcgagatggtagtgcgtttgccgttgttgag
acatcaggcatcaccggagggcggtcatga
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integrated database retrieval system
