Pseudomonas mediterranea: E3Z27_22290
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Entry
E3Z27_22290 CDS
T08284
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed00061
Fatty acid biosynthesis
pmed00071
Fatty acid degradation
pmed01100
Metabolic pathways
pmed01212
Fatty acid metabolism
pmed02024
Quorum sensing
pmed04146
Peroxisome
Module
pmed_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
E3Z27_22290
00071 Fatty acid degradation
E3Z27_22290
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
E3Z27_22290
09145 Cellular community - prokaryotes
02024 Quorum sensing
E3Z27_22290
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pmed01004
]
E3Z27_22290
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmed04147
]
E3Z27_22290
Enzymes [BR:
pmed01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
E3Z27_22290
Lipid biosynthesis proteins [BR:
pmed01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
E3Z27_22290
Exosome [BR:
pmed04147
]
Exosomal proteins
Exosomal proteins of breast milk
E3Z27_22290
Exosomal proteins of breast cancer cells
E3Z27_22290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
NFACT-R_2
AMP-binding_C
AMP-binding_C_3
CbiC
Motif
Other DBs
NCBI-ProteinID:
QHA84190
LinkDB
All DBs
Position
complement(5118227..5119789)
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AA seq
520 aa
AA seq
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MSGGFINQLKQALQGNRQAVCAVDWTSGTESVALTYGELEHRALNLAAELQRRFATPAHG
DQVVLGIATRNSSDWLVADLACLFAGITALPLPLAFSQSQAEHLAERCDGFLVDAAGQRT
LAQRWKLNFPDSRLRRLGEPVIEQPLLHTPDGEGDWICKIIHTSGTTSRPKGVRLSNQAV
GAVLASLRERMPVNAHRRYLSLVPLSLLLEQVTAAYLPLLAGGTVHFLPPSEALLGEPGA
SPQRLVDWILQVQPTALTVPPVMINRFLEQLNDGGEAGDRLASYLKSGAHITCGGAAVSI
DALHALAEQGIEVYQGYGLSENASVVSMNTFEEQRLGSVGKPLPHVQVRIGVDQTIEVKS
SSLFSGYSGTDPSACSMSGDGWMDTGDLGMLDEDGYLYVHGRKKNVICLPNGRNVSPEQV
ELEYRKYPGVNDAAVFFDEQHGLVALLCVESTPASDELVTWSTGRFSDIERPNRLWLLNK
DDPLIEQLYTVTGRPKRADIATVFSTLQGNAFNEHTCLSL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtggtttcatcaatcagttgaaacaggcgctgcagggcaatcgccaggcggtc
tgcgcggttgactggacgtcgggcaccgagtccgtggcgctgacctacggcgaattggag
caccgggcgcttaatctggctgcggagctgcaacggcgtttcgcaacgccggcccatggc
gatcaagtggtgctggggattgcgacgcgcaatagcagtgactggctggtagccgacctg
gcctgtctgtttgccgggattaccgcgctgccgttgccactggcgttcagtcaatcccag
gccgagcacctggccgagcgttgcgacggattcctggtggatgccgcagggcaacggaca
ctggcacagcgctggaagctgaatttccccgacagccgtctgcgccgtctcggcgaaccg
gtgatcgaacagcccctgttgcacactccggacggcgagggcgactggatctgcaagatc
attcacacctcgggtaccaccagccggccgaaaggcgtgcgcctgagcaatcaggcggtt
ggcgcggtactggcgtcgctgcgcgaacgcatgccggtcaatgcccatcgtcgatatctg
tcgctggtgccgttgagcctgctgctcgaacaggtgaccgccgcgtacctgccgctcctg
gccggtgggaccgtgcatttcctgccgccgagcgaagcattgctcggcgagcccggggcg
tcgccgcagcgtctggtcgactggatcctgcaggtccagccgacggcgctgacggtaccg
ccggtcatgatcaatcgcttcctcgaacaattgaacgatggcggcgaggcgggagatcgg
ctggcgagttacctgaagtccggggctcatatcacctgcggcggcgcagcggtgagtatc
gatgccctgcacgctctggccgagcaaggcatcgaggtgtaccagggctacggactgtcg
gagaacgcctcggtggtcagcatgaacaccttcgaagagcagcgcctgggcagtgtcggc
aaaccgctgccccatgtccaggtgcggatcggcgtcgaccagaccatcgaggtcaagagc
agctcgctgttcagcggttactccgggaccgaccccagcgcgtgctccatgtctggcgat
ggctggatggacaccggcgacctggggatgctcgacgaagacggctacctctatgtgcac
ggccgcaagaagaacgtgatctgcctgcccaacggccgcaatgtcagccccgagcaggtc
gagctggagtaccgcaagtacccgggcgtgaacgacgccgcggtgttcttcgacgagcaa
cacggcctcgtggcgttgctgtgtgtcgagtcgacgccggccagcgatgaactggtgacc
tggtcgaccggccgtttctccgacatcgaacgaccgaaccggctctggttgttgaacaag
gacgatccgttgatcgagcagctctacaccgtcaccggccgaccgaaacgtgccgacatc
gccactgttttttccactctgcaagggaacgcattcaatgagcacacctgcctttcactt
tga
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