Pseudomonas mediterranea: E3Z27_22360
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Entry
E3Z27_22360 CDS
T08284
Symbol
ruvA
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E3Z27_22360 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmed03400
]
E3Z27_22360 (ruvA)
DNA repair and recombination proteins [BR:
pmed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E3Z27_22360 (ruvA)
RecFOR pathway proteins
E3Z27_22360 (ruvA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RuvA_N
RuvA_C
HHH_5
HHH
RecR_HhH
Transposase_20
IMS_HHH
HHH_8
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
QHA84202
LinkDB
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Position
complement(5129847..5130455)
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AA seq
202 aa
AA seq
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MIGRLRGTLAEKQPPHLILDVNGLGYELEVPMTTLYRLPSVGEPLTLHTHLVVREDAQLL
YGFVGKRERDFFRELIRLNGVGPKLALALMSSLEVDELVRCVQSQDTSALTKVPGVGKKT
AERLLVELKDRFKAWEAVPAMFALVPNQPDAPVPAASAENDAVTALISLGYKPQEASKAI
SAIKEKGLSTEDMIRRALKGMI
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
gtgattggacgcttgcgcggtaccctggctgaaaaacagccgccgcacctgattctggat
gtaaatggcctgggctatgagctggaagtgcccatgaccacgctgtatcgcttgccgtcg
gtcggtgaaccgctgacgttgcacacccatttggtcgtgcgcgaggatgcgcagttactc
tatggtttcgtcggcaagcgcgagcgagactttttccgtgagttgatccgtctcaatggt
gtgggtccgaaactggccctggccttgatgtcgagcctggaagtcgacgagctggtgcgt
tgcgtgcaatcccaggacacgtcggccctgaccaaagtgccaggtgtcggcaagaaaacc
gccgaacgcctgctggtggagctcaaggatcgcttcaaggcctgggaagcggtgccggcc
atgtttgcgctggtgccgaaccagcctgatgcaccggtgccagcggccagtgccgagaac
gacgcggtcactgcgctgatctccctgggctataagccgcaggaagccagcaaggcgatt
tccgccatcaaggaaaaaggcttgagtactgaagacatgattcgtcgtgccctgaaggga
atgatctaa
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