Pseudomonas mediterranea: E3Z27_23180
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Entry
E3Z27_23180 CDS
T08284
Name
(GenBank) RHS repeat protein
KO
K11021
insecticidal toxin complex protein TccC
Organism
pmed
Pseudomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
pmed02042
]
E3Z27_23180
Bacterial toxins [BR:
pmed02042
]
Type III toxins: Intracellular toxins
Others
TccC-type insecticidal toxin
E3Z27_23180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Motif
Other DBs
NCBI-ProteinID:
QHA84353
UniProt:
A0A6I6QE71
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All DBs
Position
complement(5337070..5339907)
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AA seq
945 aa
AA seq
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MNMDHATPRLIAVDPRFLPVRSVDYCRTHEREPVQSRVNRSLFDPAGRVVKQWDPRLWAL
QQDDAATPANLSTVHTLSGDVLLANSVDAGWQLDLPGLASESLRGWDSRGTQREVVFDNL
LRPVAVFEQGSGQPRTCVERMQYGAPGQGQQAFNQYGQLLRHDDPAGTLLLASFALTGQN
LALNRRFCLDGAMPDWPASEADRESLLEPGDGALSTWRLGPLGDVLEQVDARGNRQRQVL
TRDGRLFSSQLLLQGQSQWQSLVSEVDYNAQGQIEREMAGNGVQTTLTYAPENGWLMERH
VRRAGQSLQHQIYAYDAVGNVLGIEDKALPVRYFANQRIDPISRFRYDSLYQLIEAIGWE
AGGPNQGPDSVGRVDPAALSNYRQTYRYDDSGNLLELIHVGAQNHGRQLQAARYSNRCLP
YRDGVPPTEEEIAAAFDARGNCLALESSRPLAWDLRNQLCSVTPVERASGLDDREAYVYD
GGGQRVRKLRTLHTGARTLAAEVRYLPGLELRADSGTGESLQVITAQGGLGSVRVLHWDS
PPPSGANDHYRYGVAEHLGSISLELDQDGRIISREHFYPFGETAFLAGDDVIEVSYKTVR
YSGKERDATGLYYYGYRLYAPWLQRWASPDPAWAVDGLNFYRMVRNNPLTLFDTDGRIPT
GAAPVPPPMRPPGSPPLPPPPPLGRGVPPPPPLTGGPPPLPGLAPRAAPAREFEAIVLAP
PNMPGNLPSANWEVESHVDIVELASVISELFGSPRRPIVITGVSQEELFNKIRAAPGNET
MEFDAMNLSVNPAAWTAPEGIIYMGVDSPDYSDNGQLDVDKIRSTIVHESLHYSSYRHVG
FQAETDLGVQNLNYDEYVTDYFAYKVFTKMFPGAVYKTGYFTKDNNNNFMQWGGNLAKFM
VDSGHVTDRELAGSYFGTGKLRKLPEPSLSKWKDFAKRKNKPLTF
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggatcacgctacgccgaggctgattgcggtggatcccaggttcctgccggtt
cgttcggtggattattgccgcacacacgagcgtgagcccgtgcaatcgcgggtcaaccgc
agccttttcgacccggccgggcgtgtggtcaagcaatgggacccgcgcctgtgggccctg
caacaggacgatgcggcaaccccggccaatctttctacggtgcatacgctgtccggtgac
gtgttgctggcgaacagtgtcgatgcgggctggcagctcgacctacccgggctcgccagt
gaaagcctgcgaggctgggatagccggggcacgcagcgggaggtagtcttcgacaacttg
ctccgcccggtggcggtgttcgaacagggtagcgggcaaccgcgcacctgcgtcgagcgg
atgcaatatggcgccccgggccagggccagcaggccttcaatcaatacggacaattgctc
cgtcacgatgacccggcgggcaccttgttgctggcgtcctttgccctgaccggccagaac
ctcgccctgaaccgacgtttctgcctggatggggccatgcctgactggccggcgtcggag
gccgatcgcgaatccttgctcgaacccggcgacggtgccttgtcgacctggcgtctcggt
ccgctgggcgatgtactggagcaggtcgacgccaggggcaatcggcagcgccaggtactg
acccgcgatggccggttgttcagcagccaattgttgttgcagggccagagccaatggcaa
tcgctggtgagcgaggtcgactacaacgcccaaggccagatcgaacgggaaatggccggc
aacggcgtgcagaccacgctcacttacgcccctgaaaatggatggctgatggagcgccat
gtgcggcgagccggccagtcgttgcagcaccaaatttatgcctacgacgccgtgggcaat
gtactgggcatcgaggacaaggcgttgccggtgcgttacttcgccaaccagcgcatcgac
ccgatcagtcgtttccgttacgacagcctctatcaattgatcgaggccatcggatgggag
gcgggcggcccgaatcaggggcccgactctgtggggcgcgtcgacccggccgccctcagc
aattaccgccaaacctatcgctacgacgacagcggcaacctgctggagctgatccacgtc
ggggcgcagaaccatggtcgccagttgcaagcggcgcgctacagcaatcgttgcctgccg
tatcgtgacggcgtgccgccgacagaagaggagattgctgcggcgttcgatgcgcggggc
aactgcctggcattggaaagcagccggcccctggcctgggacctgcgcaaccaactgtgc
tcggtcacgccggtcgagcgagcgtcggggctcgatgaccgcgaggcgtatgtctacgat
ggcggcggccagcgggtgcgcaagctgcgcacgttgcacaccggagcccggaccctggcc
gccgaggtgcgttatctgccgggactggaactgcgcgccgacagcggcaccggggaatca
ctgcaggtcatcaccgcccagggcgggctcggcagcgtgcgggtcttgcactgggatagc
ccaccgccctcaggcgcaaatgaccactatcggtacggtgttgccgagcacctgggttcg
atcagccttgaacttgaccaggacgggcgaatcatcagccgggaacatttctatcccttc
ggtgaaacggcgttcctggccggggacgatgtgatcgaagtcagctacaagacggtccgg
tactcgggcaaggagcgggatgcgacaggactttactactacggctatcggctctatgcg
ccgtggttgcagcgttgggccagtccggatccggcctgggcggtggatgggctgaatttc
tatcggatggtccgaaacaacccgctcaccctgttcgacaccgatggcaggatacccaca
ggcgctgcacctgtgccgcctcccatgcgtcctcccggttcaccgccacttccaccacct
ccaccacttggaaggggagtaccgcccccgccgccactcacgggcggtccacccccccta
ccggggctcgctcctcgggcggcgcccgcgcgtgaatttgaagctattgtgctagcgccg
cccaacatgccgggcaacctgccctcggccaactgggaagtggaaagtcatgtggacatt
gtcgaactggccagcgtcatcagtgagctgtttggttcgccccggcgacccattgtcata
acgggcgtttcgcaggaagaactcttcaacaagataagggccgctccgggcaacgaaacc
atggagtttgatgcgatgaacctgagtgtcaatcctgctgcgtggacggcacccgaaggg
atcatctacatgggcgtggactcgccggattattccgataacgggcagctcgacgtggac
aagattcgctccaccattgttcacgagagcctgcactattcttcctaccggcatgtcggt
ttccaggccgaaacggacttgggcgtgcaaaatcttaattatgatgagtatgtgaccgac
tatttcgcctataaggtctttaccaagatgtttcccggtgcggtctataagaccggttat
ttcacgaaggataacaacaacaatttcatgcaatggggcgggaacctcgccaaattcatg
gtcgactcgggacacgtgacggatcgagagttggcaggcagctatttcgggaccggcaag
ttgagaaagctgccagagccgtcgttgtcgaagtggaaggattttgccaagcggaaaaac
aagcccctgacattttga
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