Pseudomonas mediterranea: E3Z27_23605
Help
Entry
E3Z27_23605 CDS
T08284
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pmed
Pseudomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmed03400
]
E3Z27_23605 (phrB)
Enzymes [BR:
pmed01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
E3Z27_23605 (phrB)
DNA repair and recombination proteins [BR:
pmed03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
E3Z27_23605 (phrB)
Prokaryotic type
E3Z27_23605 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QHA84434
LinkDB
All DBs
Position
5432346..5433800
Genome browser
AA seq
484 aa
AA seq
DB search
MQLIWLRSDLRVNDNTALAAAAARGPCVAVYLTSPAQWRAHDDAPCKIDFWLRNLAALSK
ALAELNIPLLIRHAPHWDQAPSVLLTLCRELNIETVHANEEYGVNEARRDAEAARCLKAQ
GIDFHSYLDQLLFKPGSVLTRTGSYFQVFSQFRKVCYSRLHLSLPKLIRAPARQAPTGIH
SDPVPTEVEGFALPSDSLRALWPAGENEARRRLDTFVDQHLDFYQSERDFPARPGTSQLS
AYLVAGVVSPRQCLHAALQANQGEFESGSAGTVTWINELLWREFYKHILVGFPRVSRHRA
FRPETEALAWRNAPEELAAWQQARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLSKNLL
IDWREGERFFMQHLIDGDLAANNGGWQWSASTGTDSSPWFRIFNPLSQSEKFDRDGLFIK
RWLPELNDLDKQQVHNPIGGLFDRSDYPAPIVNLSQSRERALGAFRNLPTRQQAVAGKSG
DQRT
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgatctggctgcgcagcgacctgcgcgtgaacgacaataccgccctggcggct
gccgcggcccgggggccttgtgtggcggtgtacctgacgagcccagcacagtggcgtgcc
catgatgatgccccgtgcaagatcgatttctggctgcgcaacctggctgcgctgagcaag
gccttggccgaactgaacattcccttgctgatccgccatgcaccgcactgggatcaggct
ccgtcggtactgctcacgctgtgccgcgaactgaacatcgaaaccgttcacgccaacgag
gaatacggagtgaatgaggcccggcgcgatgccgaagcagcccgttgcctgaaagcccag
ggcatcgattttcatagttatctcgaccaactgctgttcaagcccggcagcgtgctgacc
cgaaccggcagctatttccaggtgttcagccagtttcgcaaagtctgctacagccgcctg
cacctttcactgccgaagctgatccgtgcaccggcccggcaggcaccgaccggcatccac
agcgacccggtgcccacagaggtcgaaggatttgctctccccagtgattccttgcgcgcc
ctctggcccgccggtgaaaacgaagcccggcggcgcctcgacacgttcgtcgatcaacac
ctggacttttaccaaagcgaacgggacttcccggccaggcccggtaccagccagctttcg
gcttatctggtggcgggcgtggtctcgccgcgccagtgcctgcatgccgcattgcaagcc
aaccagggcgaattcgagagtggaagtgccggaaccgtgacctggatcaatgaattgctc
tggcgtgagttctataaacacattctggtgggctttccccgcgtgtcccgtcatcgtgcg
ttccgcccggaaaccgaagccctggcctggcgcaatgcgcccgaagagctggcggcctgg
cagcaggcccgcaccggactgccgatcatcgatgcagccatgcgtcagctattggaaacc
ggatggatgcacaaccgcttacggatggtcgttgcgatgtttcttagcaagaacctgctg
atcgactggcgcgaaggcgagcgttttttcatgcagcacctgatcgacggagacctggcc
gccaataacggtggctggcaatggagtgcctccaccggtaccgactcgtcgccctggttt
cgcatcttcaatccgctgagccaatcggaaaaattcgaccgtgacggcctgtttatcaaa
cgctggttaccggagctgaacgatctcgataagcaacaggtccataacccaataggcgga
ttattcgataggtcggactacccggctccgatcgtcaatctcagccaatcccgggaacgg
gcgttgggggctttcaggaatttgccgacgcggcaacaggccgtggctggaaaatcgggc
gatcagcgaacgtga
DBGET
integrated database retrieval system
