Pseudomonas mediterranea: E3Z27_24300
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Entry
E3Z27_24300 CDS
T08284
Name
(GenBank) aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed00260
Glycine, serine and threonine metabolism
pmed00460
Cyanoamino acid metabolism
pmed00630
Glyoxylate and dicarboxylate metabolism
pmed00670
One carbon pool by folate
pmed00680
Methane metabolism
pmed01100
Metabolic pathways
pmed01110
Biosynthesis of secondary metabolites
pmed01120
Microbial metabolism in diverse environments
pmed01200
Carbon metabolism
pmed01230
Biosynthesis of amino acids
pmed01240
Biosynthesis of cofactors
pmed04981
Folate transport and metabolism
Module
pmed_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
E3Z27_24300
09102 Energy metabolism
00680 Methane metabolism
E3Z27_24300
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
E3Z27_24300
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
E3Z27_24300
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
E3Z27_24300
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
E3Z27_24300
Enzymes [BR:
pmed01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
E3Z27_24300
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QHA84554
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Position
5580851..5582104
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AA seq
417 aa
AA seq
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MFSRDLTIAKYDADLFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANAAVYLALLSAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGIDGNGLIDYDEVERLALEHKPKMIVAGFSAYSQV
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARANADIEKKLNGAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQQQVVKNAKAMAGV
FIERGFDVVSGGTENHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactattgccaagtacgacgccgatctctttgccgccatggag
caagaagctcagcgccaggaagagcacattgagctgatcgcttcggaaaactacaccagc
cccgcggtgatggaagctcaaggctcggtactgaccaacaagtacgccgaaggctacccg
ggcaagcgctactacggtggttgcgagtacgtcgacgtggtcgagcaactggccatcgac
cgcgccaaggagctgttcggcgccgattacgccaacgtccagccccacgccggttcccag
gccaacgccgccgtctacctggcgctgctgtcggctggcgataccatcctgggcatgagc
ctggcccacggcggtcacctgacccacggtgccagcgtttcgtcctccggcaagctgtac
aacgccgtccagtacggcatcgacggcaacggcctgatcgactacgacgaagtcgagcgc
ctggccctcgagcacaagccgaaaatgatcgtggccggtttctccgcctactcccaggtc
ctcgatttcccacgtttccgcgccatcgccgacaaggtcggtgcctacctgttcgtggac
atggcccacgtcgccggcttggtcgccgccggcgtctacccgaacccggtgccattcgcc
gacgtggtcaccaccaccacccacaagaccctgcgaggtccacgtggcggcctgatcctg
gcgcgtgccaacgccgacatcgagaagaagctgaacggcgctgtattcccgggcgcccag
ggcggcccgctggagcacgtcatcgccgccaaggcgatctgcttcaaggaagccctgcaa
cctgagttcaaggcttaccagcagcaagtcgtgaaaaacgccaaggccatggccggcgta
ttcatcgagcgcggcttcgacgtggtgtccggcggtaccgagaaccacctgttcctgctg
tcgctgatcaagcaggacatctccggcaaagacgccgacgccgcactgggcaaggcgttc
atcaccgtgaacaagaactcggtgccaaacgacccacgttccccgttcgtcacctccggt
ctgcgcttcggcaccccggccgtgaccactcgtggtttcaaggaagccgagtgcaaggaa
ctggccggctggatctgcgacatcctggctgacctgaacaacgaagcggtcatcgacgcc
gttcgtgagaaggtcaaggcgatctgcaagaagctgccggtgtacggcgcttga
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