Pseudomonas mediterranea: E3Z27_24345
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Entry
E3Z27_24345 CDS
T08284
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pmed
Pseudomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmed03400
]
E3Z27_24345 (radA)
DNA repair and recombination proteins [BR:
pmed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
E3Z27_24345 (radA)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
AAA_16
DnaB_C
AAA_22
GvpD_P-loop
RecA
AAA
SLFN-g3_helicase
AAA_24
Rad51
DUF7125
nSTAND3
AAA_14
NTPase_1
MCM
ABC_tran
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QHA84561
LinkDB
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Position
complement(5590252..5591619)
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AA seq
455 aa
AA seq
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MAKAKRMYGCTECGSTFPKWAGQCGECGAWNTLTETMVESGGAAAPTGRTGWAGQQTQIK
TLAEVSVEEIPRFSTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIATRMP
ALYVTGEESQQQVAMRARRLGLPQDQLRVMTETCIETIIATARLEKPKVMVIDSIQTIFT
EQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRPVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLTRAQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKGNAPKEAPAGLQIIAVTRLEQALDALFE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggcaaagcgcatgtacggctgcaccgagtgcggctcgacctttcccaaatgg
gctggccagtgcggtgagtgcggcgcctggaataccttgaccgaaaccatggtggaaagc
ggcggtgccgcggcgcccaccggacgcaccgggtgggccggccagcagacgcagatcaag
accctggccgaagtcagcgtcgaggagatcccgcgattttccaccgcgtccggtgaactg
gaccgcgtattgggtggcgggttggtggacggctccgtggtcttgatcggcggcgaccca
gggatcggcaaatccaccatcctgctgcaaaccctgtgcaacatcgccacgcgcatgccg
gcgctgtacgtcactggcgaggagtcccagcagcaagtcgccatgcgcgcccgccgcctg
ggcctgccccaggatcagttgcgggtcatgaccgagacctgcatcgaaaccatcatcgcc
acggcgcgcctggaaaagcccaaggtgatggtgatcgactcgatccagacgattttcacc
gaacagctgcaatcggcgccgggcggtgtgtcccaggtgcgtgaaagcgcggcgttgctg
gtgcgttacgccaagcagagcggcacggcgatcttcctggtgggccatgtcaccaaggaa
ggtgcgctggcagggccgcgggtgctggagcacatggtcgataccgtgttgtatttcgag
ggcgagtccgatggacgcctgcgcttgttgcggccggtgaagaatcgctttggcgccgtg
aacgagctgggtgtgttcggcatgaccgacaggggcttgaaagaagtctccaatccttca
gcgatctttctgacgcgtgcccaggaagaagtcccgggcagcgtggtcatggcaacctgg
gaagggactcggccgatgttggtggaggtccaggcgctggtggatgacagtcacctggcg
aacccgcgccgggtcaccctggggctggatcagaaccggctggcgatgttgctggccgtg
ctgcatcgacacggcggcattccgacccacgaccaggacgttttccttaacgtggtgggc
ggggtgaaggtgttggaaaccgcctccgacctggcgttgatggcggcggtcatgtccagc
ctgcgcaaccggccgctgccccatgatttgctggtgttcggtgaagtcggcctgtcgggc
gaagtccggccggtgcccagcgggcaggagcgactcaaggaggcggccaagcatggcttc
aaacgcgccatcgtgcccaagggcaacgcgccgaaggaagcgccggcaggtttgcagatc
attgccgtgacgcggttggagcaggcgctggatgcgttgttcgagtag
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