KEGG   Pseudomonas mediterranea: E3Z27_24530
Entry
E3Z27_24530       CDS       T08284                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pmed  Pseudomonas mediterranea
Pathway
pmed03030  DNA replication
pmed03430  Mismatch repair
pmed03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pmed00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    E3Z27_24530
   03430 Mismatch repair
    E3Z27_24530
   03440 Homologous recombination
    E3Z27_24530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmed03032]
    E3Z27_24530
   03400 DNA repair and recombination proteins [BR:pmed03400]
    E3Z27_24530
Enzymes [BR:pmed01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     E3Z27_24530
DNA replication proteins [BR:pmed03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     E3Z27_24530
DNA repair and recombination proteins [BR:pmed03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     E3Z27_24530
SSDB
Motif
Pfam: RNase_T Rv2179c-like Ribosomal_L26
Other DBs
NCBI-ProteinID: QHA84595
LinkDB
Position
complement(5628078..5628689)
AA seq 203 aa
MERIAVIDFETTGITPSSSCRATEIAVVMLEQGRIVDRYQSLMNAGVRVPAFIEQLTGIS
NAMLRSAPSAERVMNEVNEFVGTTPLLAHNAAFDQKFWDFELGRIKRTRLQNFACSLLLA
RRLIPAAPNHKLGTLNAFAGLPHTGQAHRAMADAEMAANLTAHLASELRHKHGLRELSHD
LLCSLQKVPAAKINEHLKRHRGF
NT seq 612 nt   +upstreamnt  +downstreamnt
ttggaacgcatcgcagtcatcgactttgaaaccaccggaatcaccccgagcagcagttgc
cgggccacggaaatcgccgtggtgatgcttgagcaaggccggatcgtcgaccgctaccag
agcctgatgaatgccggcgtgcgggtgccggccttcatcgagcaactgaccggcatcagc
aatgccatgctgcgcagcgcgccgtcggccgagcgggtgatgaacgaggtcaacgagttc
gtcggcaccacgccgctgctggcgcataacgccgcgttcgaccagaagttctgggacttc
gaactggggcggatcaagcgcacccgcctgcagaattttgcctgttcgctgctgctcgcc
cgacgcctgataccggccgcgccgaaccacaagctcggcaccctcaacgcctttgccggc
ctgccccataccggccaggcccaccgggccatggccgacgccgaaatggccgccaacctc
accgcgcatctggcttcggaactgcggcacaagcatgggctgcgggagttgtcccatgat
ctgttgtgcagtttgcagaaggtcccggccgcgaagatcaatgagcatctcaagcgccat
cgagggttctag

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