Pseudomonas mediterranea: E3Z27_24585
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Entry
E3Z27_24585 CDS
T08284
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
pmed
Pseudomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmed03009
]
E3Z27_24585
Enzymes [BR:
pmed01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
E3Z27_24585
Ribosome biogenesis [BR:
pmed03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
E3Z27_24585
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF8666
Motif
Other DBs
NCBI-ProteinID:
QHA84605
LinkDB
All DBs
Position
complement(5638988..5639623)
Genome browser
AA seq
211 aa
AA seq
DB search
MPRPPRPASRRPGAKPPAAAPRRVAKAPPAEPKLILFNKPFDVLTQFSDGEGRATLKDFI
DIPGIYPAGRLDRDSEGLLLLTNDGQLQARIADPKHKLAKTYWVQVEGEPSAEQLQRLRE
GVELNDGMTLPAEARLLDEPQLWPRNPPVRFRKSVPTRWLELVIREGRNRQVRRMTAAVG
LPTLRLVRVRIGDWTIEGLDQGQWKEVPARL
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtcctccacgccctgcttcccgtcgtcctggcgcgaagcctccagccgccgcg
ccgcgccgtgtggcgaaggcgcccccggccgagccgaagctgatcctgttcaacaagcct
ttcgatgtgctgacccagttcagcgatggcgaggggcgggcgacgctcaaggattttatc
gacatcccgggcatttacccggccgggcgcctggatcgcgacagcgaggggctgttgttg
ctcaccaatgacgggcaattgcaggcacgtatcgccgaccccaagcacaaactggcgaag
acctactgggtacaggtggaaggtgaaccgagcgccgaacaactccagcgtctgcgcgaa
ggtgtcgagttgaacgacggcatgacgctgcccgccgaggcgcgactgctggatgagccg
cagctatggccgcgcaacccgccggtgcgctttcgcaaaagcgtgcctacgcgttggctg
gaactggtgatccgtgaggggcgcaaccgccaagtgcggcgcatgaccgccgccgtgggt
ttgccgacgctacggctggtgcgggtcaggatcggtgattggacgatcgaagggcttgat
cagggccagtggaaagaggttccggcgcgcttatag
DBGET
integrated database retrieval system
