Pseudomonas mediterranea: E3Z27_24810
Help
Entry
E3Z27_24810 CDS
T08284
Name
(GenBank) GAF domain-containing protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pmed
Pseudomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmed03000
]
E3Z27_24810
Transcription factors [BR:
pmed03000
]
Prokaryotic type
Helix-turn-helix
Other families
E3Z27_24810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
AAA_5
PAS_4
AAA_2
AAA
HTH_23
HTH_7
HTH_30
HTH_AraC
PAS_8
PAS
PAS_9
HVO_A0261_N
Diguanyl_cycl_sensor
Mg_chelatase
HTH_17
HTH_22
HTH_28
HTH_20
IclR_C
nSTAND6
HTH_50
HTH_10
Motif
Other DBs
NCBI-ProteinID:
QHA84645
LinkDB
All DBs
Position
complement(5686345..5688252)
Genome browser
AA seq
635 aa
AA seq
DB search
MHSNHLSRHAQQVLTVTQGKAHLQGPGSDPSIARSWLRCLEDYHLDPAQNLAPTVLEHGR
VLESRERLQQVLHIAGSEMTSLHQQLSGAGHAVLLTDARGVILNCVTAPSERKIFERAGL
WLGADWSEACEGTNGIGTCLVERQALTIHQEEHFRGRHTGLTCSASPVFDPHGELLAVLD
VSSARPDVSRQSQFHTMALVNLSAKMIESCYFLRCFDNQWLLRFHLQAESVGLFSEGLLA
FDGEGRISAVNQSALNLLGHIRGGLLGQPVEAFFDCSLDELLGRASAQASASWPLRTRDG
RHLFAVLRGQPRSIPVPLAPPPKASEPPRLSGICLGDAQLQEHFRKALRVFERDVPLLVN
GETGCGKEAFAKAVHQASQRAGKSFVALNCAAIPESLIESELFGYRGGSFTGARKEGMRG
KLQQADGGTLFLDEIGDMPLALQTRLLRVLEDRQVVPIGGEPETVNVRIISATHRQLLER
VQDGSFREDLYYRLNGLEIPLPALRERSDKSQLLDFLLAEESGTEAVSIDEPARRALLAF
DWPGNVRQMRNVLRTLAALCDGGRIGLDDLPAMIRQARPALEDTPASEHPLEGAERLALL
NALEQTRWHMTNTAEQLGISRNTLYRKLRKHAIAR
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcaaccatttgagtcgccatgcccagcaggtcctgacggtcacccagggcaag
gcccatttgcaggggcctggcagcgatccgtcgattgcccgttcctggctgcgctgcctc
gaggactatcacctcgacccggcccagaacctggcgccgacggtgctggagcatggtcgg
gtgctggaaagccgcgagcgtctgcaacaggtgctgcatatcgccggttctgaaatgacc
agcctgcatcagcaactgtccggcgctggtcacgcggtgttgctcaccgacgcccggggc
gtgatcctcaactgcgtcaccgctcccagcgaacggaagatcttcgaacgggccggtctc
tggctcggggccgactggagtgaagcctgcgagggcaccaacggcatcggcacctgtctg
gtggaacgccaggcgctgaccatccaccaggaagaacattttcgcggtcgccacaccggc
ctgacctgctcggccagcccggtcttcgatccccatggcgaactgctggcggtgctcgac
gtgtcctcggcccggccggacgtgtcgcgccagagccagttccacaccatggcgttggtg
aatctgtcggcgaagatgatcgagagctgctatttcctgcgctgcttcgacaatcaatgg
ttgctgcgctttcatctgcaggccgagtccgtggggttgttcagcgaggggctgctggca
ttcgacggtgaagggcgaatcagtgccgtcaaccagagtgcgctcaacctgctggggcat
attcgcggcggcttgctggggcagccggtagaagcgtttttcgattgttcactggacgaa
ttgcttggccgggccagcgcccaggccagcgccagttggccgttgcgcacccgtgacggt
cggcatctgttcgcggtgctgcgtggtcagcctcgcagtatcccggtgccgctcgcgccg
ccgccgaaggcttccgagccgccgcgactgtcgggcatctgcctgggggatgcgcaactg
caggagcatttccgcaaggcgctgcgggtgttcgagcgcgatgtaccgctgctggtcaac
ggtgaaaccggttgcggcaaggaggccttcgccaaggccgtgcatcaggccagccagcgc
gccgggaaaagtttcgtcgccctcaattgcgcggccatccccgaaagcctgatcgagagc
gagctgttcggctatcgcggcggcagtttcaccggggctcgcaaggagggcatgcgcggc
aagctgcagcaggccgatggcggcaccttgttcctggatgaaatcggcgacatgcccctg
gccttgcagacccgcttgctgcgggtgctggaggatcgccaggtggtgcccatcggtggc
gaacccgagacggtgaacgtgcgcatcatcagcgccacccaccggcaattgcttgagcga
gtgcaggacggcagcttccgcgaagacctgtactaccggctcaacggcctggaaatccct
ttgccggcattgcgcgagcgcagcgacaagtcgcagttgctggattttctgctggccgaa
gaaagcggcaccgaagcggtgtccatcgacgaaccggcgcgccgggcgctgctggcgttc
gattggccgggcaacgtgcggcagatgcgcaacgtgctgcgcaccctcgccgcgttgtgc
gacggtggccggatcgggctggacgatctaccggcgatgattcgccaggcacgcccggcg
ttggaggacacacccgcgtccgaacatccgctggagggcgcggaacggctggccttgctc
aatgcgctggaacagacccgctggcacatgaccaacacggccgagcaactgggcatcagc
cgcaataccttgtaccgaaagctgcgcaagcacgcgatcgctcgctga
DBGET
integrated database retrieval system
