Pseudomonas mediterranea: E3Z27_25065
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Entry
E3Z27_25065 CDS
T08284
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed00900
Terpenoid backbone biosynthesis
pmed01100
Metabolic pathways
pmed01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
E3Z27_25065 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pmed01006
]
E3Z27_25065 (ispA)
Enzymes [BR:
pmed01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
E3Z27_25065 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
E3Z27_25065 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
E3Z27_25065 (ispA)
Prenyltransferases [BR:
pmed01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
E3Z27_25065 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
QHA84690
LinkDB
All DBs
Position
5749542..5750429
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AA seq
295 aa
AA seq
DB search
MIGAYQASSQARVNAALGTLFSAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGG
AAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKQFDEACAILAGDGLQSLA
FSALLDPALSDCPAQIRLDMVSALALAAGPAGMVGGQAIDLGSVGLKLDQGALEYMHRHK
TGALIEASVKLGALASGRATAEHLQALQSYARAIGLAFQVQDDILDVESDTQTLGKRQGA
DIARDKPTYPALLGLDAAKAYALELRDQALEALRPFDAAAEPLRELARYIVERRS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcgcctatcaggccagcagccaggcccgggtcaatgctgcgttgggcactttg
tttagcgcaccgagccccgagctggcgcgcctgtacgaagccatgcgctatagcgtgatg
aacggcggcaagcgtgtgcggccgctgctggcctatgccgcatgcgaagcactgggcggc
gcggccgaacaggccaacggcgcggcgtgcgcggtggagctgatccacgcttattccctg
gtgcacgacgacctgccggccatggacgacgacgacctgcgtcgcggccagccgaccacc
cacaaacaattcgacgaagcctgcgcgatcctggccggcgatggtttgcagagcctggcc
ttcagcgccctgctcgacccggccctcagcgactgcccggcgcagatccgcctggacatg
gtcagcgccctggcgctggcggcaggccccgccggcatggtcggcggccaggccatcgac
ctgggttcggtcggcctgaagctggatcagggcgcgctggaatacatgcaccggcacaag
accggggccttgatcgaggccagcgtcaagcttggcgccctcgccagcggccgggccacg
gctgaacacttgcaagccttgcagagctacgcccgggccatcggcctggcgttccaggtg
caggacgatatcctcgacgtcgaaagcgatacccagaccctgggcaagcgccagggtgcc
gacatcgcccgtgacaagccgacctacccggccctgctgggcctcgacgccgccaaggcc
tacgccctggagttgcgcgaccaggccctggaagcgttgcgaccgtttgacgcggcggcc
gaaccgttgcgcgagctggcgcgctatatcgtcgaacgacgcagctga
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