Pseudomonas mediterranea: E3Z27_25885
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Entry
E3Z27_25885 CDS
T08284
Symbol
bioD
Name
(GenBank) dethiobiotin synthase
KO
K01935
dethiobiotin synthetase [EC:
6.3.3.3
]
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed00780
Biotin metabolism
pmed01100
Metabolic pathways
pmed01240
Biosynthesis of cofactors
Module
pmed_M00123
Biotin biosynthesis, pimeloyl-ACP/CoA => biotin
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
E3Z27_25885 (bioD)
Enzymes [BR:
pmed01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.3 Cyclo-ligases
6.3.3.3 dethiobiotin synthase
E3Z27_25885 (bioD)
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Gene cluster
GFIT
Motif
Pfam:
AAA_26
CbiA
DUF1611
Motif
Other DBs
NCBI-ProteinID:
QHA84832
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All DBs
Position
complement(5915881..5916561)
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AA seq
226 aa
AA seq
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MSQAYFITGTDTDVGKTTVAAGLLHAARQAGMSTAAGKPVASGCEVTPKGLRNADALALL
AECSVPLTYAQVNPVAFEPAIAPHLAAREAAVALTVQSLLGPMRDVLALQADFTLIEGAG
GWRVPLADQDNLSDLAMALGLPVILVVGVRLGCISHALLSAEAIARDGLQLAGWVANIVD
PKTSRLEENLATLAERLPAPCLGRVPRIKGVTAEAVAGHLHLDLLD
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggcttatttcatcaccggcaccgacaccgacgtgggcaagaccactgttgcg
gctggcttgctgcacgcggcacgacaggccggcatgagcaccgccgccggcaagcccgtg
gcctccggttgcgaagtcacgcccaaaggcctacgcaatgccgacgctctggccctgctc
gcggaatgctcggtgccactgacgtatgcccaggtcaacccggtggcgttcgagccggcc
atcgcaccacatctggcggcccgggaggccgccgtggcgttgacggtgcagtcgttgttg
gggccgatgcgtgacgtactggccctgcaagccgatttcaccttgattgaaggtgcgggc
ggctggcgtgttccgttggccgatcaggacaatctctcggacctggcaatggccttgggc
ctgccggtgatcctggtggtaggagtacggctgggctgcatcagccacgcgttgctcagc
gccgaagccattgcccgggatgggctgcaattggccggttgggtggcgaatatcgtcgac
cccaagacgtcgcgcctggaggaaaacctggccacgctcgccgagcgccttccggcaccg
tgcctgggccgggtgccacgaatcaagggcgtgacggcggaagccgtggctgggcacctg
catctggacctgctggattag
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