Pseudomonas mediterranea: E3Z27_26155
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Entry
E3Z27_26155 CDS
T08284
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K17736
AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pmed
Pseudomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmed03000
]
E3Z27_26155
Transcription factors [BR:
pmed03000
]
Prokaryotic type
Helix-turn-helix
AraC family
E3Z27_26155
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
DJ-1_PfpI
HTH_AraC
TraK_2
Motif
Other DBs
NCBI-ProteinID:
QHA84885
LinkDB
All DBs
Position
complement(5982627..5983568)
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AA seq
313 aa
AA seq
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MSQDFYFLLMPGFSAIGFISAIEPLRVANRFRGELYRWHVLSADGGAVLASNGMSVNADA
ALEPLKKGATLWVVAGFEPLKFATPALERWLHRLDKEGVTLGGIDTGSVVLADAGLLEGH
RVTLHWEAIEAFKESYPQLSVTQELFEIDRRRITCAGGTASIDLMLDLIGQAHGADLAIQ
VSEQFVLGRIRPRKDHQRMEIASRYGIRNKKLVHVIGEMETHSEPPLSTLELAESIGVTR
RQLERLFRLHLNDTPSNFYLRLRLEKARQLLRQTDMSVLEVSIACGFESPSYFTRSYRAR
FERCPREDRRKVV
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaggacttctacttcttgctgatgccgggtttttcggccatcggtttcatttcg
gccatcgagccgttgcgggttgccaatcgctttcgcggtgaactgtaccgctggcatgta
ttgagtgccgatggcggcgcggtcctggccagcaacggcatgtcggtcaacgccgatgct
gcgctggagccgttgaagaaaggcgccaccttgtgggtagtggcggggttcgaaccgctg
aagttcgccacgccggcgctggagcgctggttgcatcggctggacaaggagggcgtgacg
ctcggcggcatcgatacgggcagtgtagtcctggccgatgcggggttgctggaagggcat
cgggtcacccttcactgggaggccatcgaggcgttcaaggagtcttatccacagctcagc
gtgacccaggagcttttcgaaatcgatcgtcgccgcatcacctgcgccgggggcactgct
tccatcgatctcatgctggacctgatcggccaggcccacggcgcggacctggcgattcag
gtcagcgaacaattcgtgctcggccgcatccgcccgcgcaaggatcaccagcgcatggaa
atcgccagtcgctacggcatccgcaacaagaagctggtgcatgtcattggtgagatggaa
acccacagcgaaccgcccctgagcacccttgagctggccgaatccatcggggtcacccgg
cgccagctcgaacggctgttccgcctgcacctgaacgacacccccagcaacttctacctg
cgcctgcgcctggaaaaggcccggcaactgctgcgccagaccgacatgagcgtgctggaa
gtgagcatcgcctgcggattcgagtcaccgtcgtacttcacccgcagttaccgggcgagg
ttcgagcggtgtcctcgggaggatcggcgcaaggtggtctga
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