Pseudomonas mediterranea: E3Z27_26675
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Entry
E3Z27_26675 CDS
T08284
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pmed
Pseudomonas mediterranea
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmed03021
]
E3Z27_26675 (rpoH)
Transcription machinery [BR:
pmed03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E3Z27_26675 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ImpA_N
UCR_14kD
IF2_N
Motif
Other DBs
NCBI-ProteinID:
QHA84982
LinkDB
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Position
complement(6092357..6093211)
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AA seq
284 aa
AA seq
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MTTSLQPAYALVPGANLEAYVHTVNSIPLLTPEQERELAESLYYEQDLEAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNEEVHRVAESLGVEPREVREMESRLTGQD
MAFDPAAEADDDSAFQSPANYLEDHRYDPARQLEDADWSDNSNTNLHEALEVLDERSRDI
LYQRWLAEEKATLHDLAQKYNVSAERIRQLEKSAMNKLKLSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttctttgcaacctgcgtatgctctggtcccgggtgcgaacctggaggcctat
gtgcacacggtgaacagcatccccttgctgacaccggagcaggagcgtgaactggccgag
agtctctattatgagcaggatcttgaggcggctcggcaaatggtgctcgcccacctgcgt
tttgtcgtacatatcgcccgcagctattccggctacgggctggcccaggccgacctgatc
caggaaggcaacgttggcctgatgaaggcggtcaagcgcttcaacccggaaatgggtgtg
cgcctggtatcgttcgcggtgcactggatcaaggcggaaatccacgagttcatcctgcgc
aactggcgcatcgtgaaggtcgcgaccaccaaggcccagcgcaagctgttcttcaatctg
cgcagccagaagaagcgtctggcctggttgaacaacgaagaagtccatcgggtagccgaa
agcctcggtgtggagcctcgtgaagtccgcgagatggaaagtcggctgaccggccaggac
atggccttcgacccggccgccgaagcggacgacgacagcgccttccaatcgccggccaac
tacctggaagaccaccggtatgacccggcgcgtcagctggaagacgccgactggagcgac
aactccaacaccaacctgcacgaagcactggaagtgctggacgagcgcagtcgcgacatt
ctctaccagcgctggctggcggaggaaaaggccacgctgcacgacctggcgcagaagtac
aacgtgtcggcggaacggattcgccagcttgagaaaagtgcgatgaacaagctcaagctg
tcgattgcggcctga
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