Pseudomonas mediterranea: E3Z27_27750
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Entry
E3Z27_27750 CDS
T08284
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed02025
Biofilm formation - Pseudomonas aeruginosa
pmed03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
E3Z27_27750 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
E3Z27_27750 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pmed02044
]
E3Z27_27750 (tssM)
Secretion system [BR:
pmed02044
]
Type VI secretion system
Imp/Vas secretion system core components
E3Z27_27750 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
AAA_10
nSTAND_NTPase5
Bax1-I
T7_gp14
Motif
Other DBs
NCBI-ProteinID:
QHA85182
LinkDB
All DBs
Position
complement(6328355..6331855)
Genome browser
AA seq
1166 aa
AA seq
DB search
MKAFFSFMIRWVIPLLGLIALSLIIWFVGPLLDWLVPEGRRWALIILVFAVWIAYRVFRI
IQARRQAAEVMRSLAEQTPPDPTSIATAEELETLRQRMDEALALLKKAKLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGAGAVRGVGGTRNCDWWFTDQAVLLDTAG
RYTTQDSDAAIDKAAWLGFLGLLKKQRARRPIDGAFIAISLSDLLLGSDAERAAHAAAIR
LRIQELYTQLGVRFPVYLMLTKLDLVPGFMEYFDTLSKEERAQVWGMTFALDDGKSNDSP
LAHLQSEFAGLEQRLNDRLVERLQQERDPARRDLIYGFPQQFGALKDCLQSFLDGVFKPN
AFEERVLLRGVYFTSGTQEGSPIDRLIGSMAQSMNLDRQHLARQTGTGRSYFIEKLFTAV
AFAERGLVGVDPKVERRRKWIARGVLASTVLVVLVVSTLWWVSYRANQAYIAQVDQKVAP
LGQTVQNLSPAQRDVLAVLPLLNAVKHLAGDAPDWAEGLGLYQGDMLEAESGSVYRKLLI
AVFAPRLLTRIEEQLHSGGNSDFLYEGLKAYLMLADNEHYDADFIKAWIALDWDRSLPRD
LPAEQRLALSAHLQALFERHPPTARLDPRLIEDLRRQLQQLPVAQRVYDRIKRQKLPEGI
PDFRINEAAGRDAALVFSRKSGKPLGEPLSGFFTVKGYRQGFLLTSLSQTGTLAEEQWVL
GHEEADQQNVASLAADVRRLYFQDYQRQWDALLADIDFVPITSVAQAADVLRVISGPTSP
LKKLLVAVAKETDLQQDERLLAAQGAPAEGGVDKLKERLGSLLGQEQATQSAPQASDDPI
TAHFAELNSIVSKNDGEPAAIDGLLADMNALYVQVSAMVGASGDALLGEAKNQAAAAATR
VSLNAERQPPLVQGLVKSVVNSTTNSMMGGVRNQLNAAWTSEVVNIYRQSLAGRYPMSPG
SARDATLDDFGQFFGVGGVMDNYFRKYLQPYVDTSTPTWRWQPGAAQKLGIAPGVLQTFQ
RAAAIRDAFFRSGGTQPMVRFELKPVAMDSTITQFLLDLDGQQLSYDHGPSRPTAMQWPN
PGSIGVVRISVMPPSSSGRSGITLDGPWAWFRLLEQSDLTAGNSPDRFNLRLRVDNASAS
YELRANSAFNPFKSRVLSGFSLPERL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgtttttcagtttcatgatccgctgggtcatcccgttgctggggctgattgcc
ctgagcctgatcatctggttcgtcggcccgctgctggactggctggtgccggaagggcgg
cgctgggcgttgatcatcctggtgttcgcggtgtggatcgcctaccgcgtgttccgcatc
atccaggcccgccgccaggccgccgaagtcatgcgcagcctggccgagcagacaccgccc
gaccccaccagcatcgccaccgccgaagagctcgaaaccctgcgccagcgcatggacgaa
gccctggcgctgttgaagaaggccaagctgggcggtgacgagcgccgtaacctctacgag
ctgccgtggtacgtgatcatcggtccgccgggttcgggcaagaccaccgcgttggtcaac
tccgggctgcatttcccgttggccgcccagttgggcgccggcgcggtgcgcggcgtcggc
ggtacccgtaattgcgattggtggttcaccgatcaagccgtcctgctcgacactgccggt
cgctataccacccaggacagcgacgcggccatcgacaaggccgcctggctgggcttcctc
ggcctgctgaaaaaacagcgggcccggcgtccgattgacggtgcgttcatcgccatcagc
ctgtccgacctgctgctgggcagcgatgccgagcgcgccgcccatgccgcggcgatccgc
ctgcgcatccaggagctgtacacccaattgggcgtgcgtttcccggtctacctgatgctg
accaagctcgacctggtgcccgggttcatggagtacttcgacaccctgagcaaggaagag
cgcgcccaggtctggggcatgactttcgccctcgacgacggcaagagcaacgacagtccg
ctggcgcacctgcaaagcgaattcgccggcctggaacagcgcctcaacgaccggctggtg
gagcgtctgcaacaggaacgcgacccggcgcggcgtgatctgatctacggtttcccgcag
cagttcggagcgttgaaggattgcctgcaaagcttcctcgacggcgtgttcaaacccaac
gccttcgaagagcgcgtgctgctgcgcggtgtgtatttcaccagcggcacccaggaaggc
agccccatcgaccgcctgatcggttccatggcccagagcatgaacctggaccgccagcac
ctggcgcgccagaccggcaccgggcgcagctacttcattgaaaaactgttcaccgcggtg
gctttcgccgagcgtgggctggtgggcgtcgacccgaaggtcgagcgccggcgcaaatgg
atcgcccggggcgtattggcctccaccgtgctggtggtgttggtggtcagcaccttgtgg
tgggtcagctatcgcgccaaccaggcctacatcgcccaggtcgaccagaaggtcgcgccg
ctgggccagaccgtgcagaacctcagcccggcacaacgtgacgtgctcgcggtgctgccg
ttgctcaacgccgtgaaacacctggcgggcgatgcgccggattgggccgagggcctgggc
ctgtaccagggcgacatgctggaagccgagtccggcagcgtctatcgcaagttgctgatc
gcggtgttcgcgccgcgcctgctgacgcgcatcgaagagcaactgcacagcggcggcaat
tcggatttcctctacgaaggcttgaaggcctacctgatgctcgccgacaacgagcattac
gacgccgacttcatcaaggcctggatcgccctcgactgggatcgcagcctgccccgtgac
ttgccggccgaacagcggctggccctgagcgcgcatctgcaagcgctgttcgaacggcat
ccgcctaccgcacggctggacccacggttgatcgaagacctgcgccggcagttgcaacaa
ctgcccgtggcccagcgggtctacgaccgaatcaagcggcagaaactgcccgagggcatc
ccggacttccgcatcaacgaagccgccgggcgtgacgccgcgctggtgttcagtcgcaag
agcggcaagccgttgggcgagccgctgagcgggttcttcaccgtcaaaggttaccgccag
ggcttcttgcttaccagcctgagccagaccggcaccctggctgaagagcaatgggtactg
ggtcacgaagaggccgatcagcagaacgtcgccagcctggccgctgatgtgcgccggttg
tacttccaggactatcagcggcaatgggatgccttgctcgccgacatcgattttgtgccg
atcaccagcgtggcccaggccgccgacgtgctgcgggtgatctccgggccgacctcgccg
ttgaaaaagctgttggtggcggtggcgaaggaaactgacctgcaacaggacgagcgtttg
ctggccgcccaaggcgcgccggcagagggcggtgtggacaagctcaaggaacgcctgggc
agcttgctcggccaggagcaggcgacgcaaagcgcgccacaggccagcgatgatccgatc
acggcgcactttgccgagctcaacagcatcgtcagcaaaaacgacggtgaaccggccgcc
atcgatggcctgctggccgacatgaatgccttgtacgtgcaggtcagcgccatggtcggc
gccagcggcgatgccttgctcggcgaagccaagaaccaggccgcggcggccgccacccgg
gtcagcctcaacgccgagcgtcagccgccgttggtgcaagggctggtcaagtcggtggtc
aattccaccaccaacagcatgatgggaggggtgcgcaatcaactgaacgccgcctggacc
agcgaagtggtgaacatctaccgtcagtccctggccgggcgttatccgatgtcgccgggc
agtgcccgggacgcgaccctggatgacttcggccagttcttcggcgtcggcggggtgatg
gacaactacttccgcaagtacctgcaaccttacgtcgatacttccacaccgacctggcgc
tggcagccgggcgcggcgcagaaactcggcatcgcccctggcgtgctgcagaccttccag
cgcgcggcggccattcgcgatgcgttcttccgttccggcggcacccagccgatggtgcgc
ttcgagctcaagccggtggcgatggactcgaccatcacccagttcctgctcgatcttgac
ggccaacagttgagctacgaccacggcccgagtcgcccgaccgccatgcagtggccgaac
ccgggcagcatcggcgtggtgcggatctcggtcatgccgccgtcctccagcggtcgctcc
ggcatcaccctggacgggccgtgggcctggttccggctgctggagcagtcggacctgacc
gccggcaattcgccggatcgcttcaacctgcggctgcgggtcgataacgccagcgcttcc
tacgagctgcgggccaacagcgccttcaacccgttcaagagccgcgtgctcagcggcttc
agcctgccggagcggctatga
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