Pseudomonas mediterranea: E3Z27_27760
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Entry
E3Z27_27760 CDS
T08284
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
E3Z27_27760 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pmed02044
]
E3Z27_27760 (tssK)
Secretion system [BR:
pmed02044
]
Type VI secretion system
Imp/Vas secretion system core components
E3Z27_27760 (tssK)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
QHA85184
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Position
complement(6333163..6334497)
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AA seq
444 aa
AA seq
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MSWNNRVVWSEGMFIGTQHFQQHDRYLENLIDARSRPLSAGAWGFSELLIDQGLLVQGKL
AIISARGLLPDGTPFNIPQDDVAPTPLNIDDNLRDGLVYLALPLKRAGARDTVDEGEPLG
AARYVSQVSEVRDDNAPFENRAPVALGSRALRLLTTEDGIGDYAAIGVVRIKEKRADRAL
VLDDTYIPPLLDVVASKPLAAFRSELLGLLHQRGEALAGRVVASGAGGASEIADFMLLQL
VNRAQPLIQHLSQLSPLHPERFYSELVALAGEFSTFTASGRRPQEYPPYQHDDLVLSFTP
VMQALREALSMLIDSKATPIPIVEKAYGIHVAMLADKTLLDSASFILVVRADVPAETLRS
RFGQQSKVGSVEHIRDLVNLQLPGIGLLPLPVAPRQLPYHAGSTYYELDRGSDHWKQLGN
SGGFAFHIAGQFPGLNLAFWAIRG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggaacaatcgcgtggtctggtcggaaggcatgttcatcggaacccagcacttc
caacagcacgaccgttacctggaaaacctcatcgacgcacgcagccggcccctgtcggcc
ggtgcctggggcttttccgaattgctcatcgaccagggcctgctggtccaaggcaagctg
gcgatcatttcggcgcggggcctgttgccggatggcacgcccttcaacattccccaggat
gatgtggcgccgacgccgctgaatatcgacgacaacctgcgcgacggcctggtctacctg
gccctgccgctcaagcgcgccggcgctcgcgacaccgtggacgaaggcgagcccctgggg
gctgcgcgttatgtcagccaagtcagtgaagtgcgcgacgacaacgcaccgtttgaaaac
cgcgcgccggtggccctcggttcccgggcgctgcgtctgttgaccaccgaggacggcatc
ggcgactacgccgccatcggcgtggtgcgcatcaaggagaaacgcgccgaccgcgccctg
gtgctcgacgacacctacattccgccgctgctggatgtggtcgcctccaagccgttggcg
gcgtttcgcagtgagctgctgggcctgctccatcaacgcggcgaagccctcgccgggcgg
gtggtggcgtccggcgccggtggtgcttcggagatcgccgacttcatgctgctgcaactg
gtcaaccgtgcccagccgctgatccagcacctcagccagttgagcccgttgcaccccgag
cgcttctacagcgaactggtggcattggccggagaattctccaccttcaccgcgtccggg
cgacgaccgcaggaatacccgccctaccagcatgacgacttggtgctgagcttcacgccg
gtgatgcaagcgttgcgcgaggccttgtcgatgctgatcgacagcaaggccacaccgatt
ccgattgtcgagaaagcctacggtatccacgtggcgatgctggccgacaagactctgctc
gacagcgccagcttcatcctggtggtgcgcgccgacgttcccgccgaaaccctgcgcagt
cgcttcggccagcagagcaaggtcggctcggtggagcacatccgcgacctggtcaacctg
caactgccgggcatcggcctgttgccgttgccggtggcgccacgtcagcttccgtaccac
gccggctccacctactacgaactcgaccggggcagcgaccactggaagcagctgggcaac
tccggcggctttgcgttccacatcgccgggcagttcccagggctgaacctggcgttctgg
gcgatccgaggataa
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