Pseudomonas mediterranea: E3Z27_27775
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Entry
E3Z27_27775 CDS
T08284
Symbol
tssA
Name
(GenBank) type VI secretion system protein TssA
KO
K11902
type VI secretion system protein ImpA
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
E3Z27_27775 (tssA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pmed02044
]
E3Z27_27775 (tssA)
Secretion system [BR:
pmed02044
]
Type VI secretion system
Imp/Vas secretion system core components
E3Z27_27775 (tssA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ImpA_N
Motif
Other DBs
NCBI-ProteinID:
QHA85187
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All DBs
Position
6337060..6338097
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AA seq
345 aa
AA seq
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MDVPLLLAAVSANSPCGEDLEYDADFLRLERDSRGQPERSMGDSILPAEPPEWRSIQQQS
LDLLQRSKDLRITHFLLQSSLALEGLSGLARVLTLISELLKQYWADLHPRLDADDDNDPT
VRINALAGLTSDVTIRLLRESVLARSRAFGPVSLRAAANASGLQSFADESLGAEQLAGAL
LDCDPEQLEITRAALLEARAAAEAIEQQVSDQVGSAQGVDLGPLKQPLKMALQILGQFAP
QSGDSALPDTVAGDSTAPAEYTSAPSAPRNTGTSTVSGEINNRDDVLRSLDRILAYYTRH
EPSSPLPVLLNRAKNLVHADFAAIVRNLIPDGMSQFENLRGPDSE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtgcctttgttgctcgccgccgtttccgcgaactcgccttgtggcgaagacctg
gaatatgacgcggatttcctgcgcctggagcgtgattcccgaggccaacccgagcgcagc
atgggcgactcgatattgcctgccgagccccccgagtggcgcagcatccagcaacagagc
ctggacttgctgcaacgcagcaaagacttgcgcatcacccatttcctgttgcaaagctcc
ctggccctcgaaggtctttcaggcctggcccgcgtattgacgctgatcagcgaattgctc
aagcaatactgggccgacctgcacccgcgcctggatgccgatgacgacaacgatcccacc
gtgcgcatcaacgccctcgccggcctgacgtccgatgtcaccatccgcctgctgcgcgag
agcgtcctggcccgctcgcgcgccttcggccccgtcagcctgcgcgccgccgccaacgcc
agcggcctgcaaagcttcgccgatgaaagtctcggggccgaacaacttgccggcgcattg
ctcgactgcgaccccgagcaactggaaatcacccgtgcggcgctgctggaagctcgtgcc
gccgccgaagccatcgaacagcaggtcagcgaccaggtcggttccgcccagggcgtggac
ctcggcccgctgaagcagccactgaagatggcgttgcagattctcggtcagttcgcaccg
cagagcggcgacagcgccctcccggacacggtcgccggcgacagcaccgcgccagccgaa
tacaccagcgcgccgagcgcaccgcgcaacaccggcacgagcacggtcagcggtgaaatc
aacaaccgcgacgacgtgctgcgcagcctggatcggattctcgcttactacacccgtcac
gagccctccagccccctgccggtgctgttgaatcgggcgaagaatctggtgcacgccgac
ttcgcggctatcgtgcgcaacctgattccagacggcatgagccaatttgaaaacctgcgc
ggcccggacagcgaataa
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