Pseudomonas mediterranea: E3Z27_27790
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Entry
E3Z27_27790 CDS
T08284
Symbol
hcp
Name
(GenBank) type VI secretion system tube protein Hcp
KO
K11903
type VI secretion system secreted protein Hcp
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed02025
Biofilm formation - Pseudomonas aeruginosa
pmed03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
E3Z27_27790 (hcp)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
E3Z27_27790 (hcp)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pmed02044
]
E3Z27_27790 (hcp)
Secretion system [BR:
pmed02044
]
Type VI secretion system
Imp/Vas secretion system core components
E3Z27_27790 (hcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_HCP
Motif
Other DBs
NCBI-ProteinID:
QHA85190
UniProt:
A0A6I6QDU9
LinkDB
All DBs
Position
6340399..6340887
Genome browser
AA seq
162 aa
AA seq
DB search
MAVDIFIKIGDIKGESMDKAHKDEIDVLNWSWGMSQSGNMHMGSGGGAGKVNIQDLSLTK
YVDKASPNLMMHCASGKHIDKVKLTVRKAGGESQVEYMIINLEEVLITSLSTGGSGSDDR
LTENVTLNFAKVLVDYQPQKADGSKEGGPVKFGWNVRQNVKV
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgatattttcatcaagatcggcgacatcaagggcgagtccatggacaaggcc
cacaaggacgagatcgacgtcctgaactggagctggggcatgtcccagtccggcaacatg
cacatgggcagtggcggtggcgccggcaaggtaaacatccaggacctgtcgctgaccaag
tacgtcgacaaggcttcgccgaacctgatgatgcactgcgccagcggcaagcacatcgac
aaggtcaagctgaccgtgcgcaaggccggcggtgaaagccaggtcgagtacatgatcatc
aacctggaagaagtgctgatcacctccctgagcaccggcggctcgggcagcgatgatcgc
ctgaccgaaaacgtcaccctgaacttcgccaaggtgctggtggactaccagccgcagaaa
gccgacggcagcaaggaaggcggtccggtcaagttcggctggaacgtgcgtcagaacgtc
aaggtgtaa
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integrated database retrieval system
