Pseudomonas mediterranea: E3Z27_27820
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Entry
E3Z27_27820 CDS
T08284
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed02025
Biofilm formation - Pseudomonas aeruginosa
pmed03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
E3Z27_27820 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
E3Z27_27820 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pmed02044
]
E3Z27_27820 (tssH)
Secretion system [BR:
pmed02044
]
Type VI secretion system
Imp/Vas secretion system core components
E3Z27_27820 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
Clp_N
NBD_SMAX1
Zeta_toxin
AAA_25
Sigma54_activat
TniB
nSTAND3
AAA_7
ATPase_2
AAA_14
NACHT
AAA_18
Torsin
Hpr_kinase_C
CbiA
SRP54
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
QHA85196
LinkDB
All DBs
Position
6345223..6347913
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AA seq
896 aa
AA seq
DB search
MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQF
NVEPARLARDLTDALDRLPRGSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVLG
ILKTPSLRHALLGLSSEFDKVKAEALSERFDEYVGDSPENALTASDGFNAGSVPGEASGA
MAPSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAG
VGKTAVVEGFALRIVAGDVPPSLKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQAS
PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPAL
TRRFQVVQVAEPSEDKALLMMRGVASTMEQHHQVQILDEALEASVKLSHRYIPARQLPDK
SVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREHAIGVVIGTRQTQTESL
LSAERERLAELESRWAEEKTLVDELLATRATLRERVGVVDSEDASEASDNESHALREKLV
DLQQRLTALQGETPLILPTVDYQAVASVVADWTGIPVGRMARNELETVLNLDQHLKKRII
GQDHALQMIAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVIT
INMSEFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFF
QVFDKGVMEDGEGRVIDFKNTLILLTTNAGTELIADVCKNPQDVPEPEEIAKALRQPLLE
IFPPALLGRLVTIPYYPLSDEMLKAITRLQLNRIKKRVESTHKVAFDYDDAVIDLIVSRC
TETESGGRMIDTILTNSLLPDMSREFLTRMLEGKAMAGVRISAVDNELQYDFSDAA
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaatcagtcgcgccgcgttgttcggcaaactcaacagcgtggcctacaaggcc
atcgaagccgccaccgtgttctgcaaattgcgcggtaacccctatgtggaactggcccac
tggtttcaccagttgctgcaactgcaggactcggacctgcaccgcatcatccgccagttc
aacgtcgagccggcgcgcctggcccgggacctgaccgacgcgttggaccgcctgccgcgg
ggctcgacctcgatcaccgacctgtcctcccacgtcgaagaggccgtggaacgcggctgg
gtctacggcagcctgatgttcggcgaaagccaggtgcgcaccggttacctggtgctgggc
atcctcaagaccccaagcctgcgccatgccctgctgggcctgtcgtcggagttcgacaag
gtcaaggccgaagccctgagcgaacgctttgacgagtacgtcggcgactcgccggaaaac
gccctgaccgccagcgatggcttcaacgccggcagcgtgccgggcgaagccagcggcgcc
atggcccccagcgccatgggcaagcaggaagccctcaagcgctttaccgtcgacctcacc
gagcaggcccgcagcggcaagctcgacccgatcgttggccgtgacgaagagatccgccaa
ctggtggacatcctcatgcgccgtcggcagaacaacccgatcctcaccggtgaagccggt
gtaggcaagaccgccgtggtcgaaggctttgccctgcgcatcgtcgccggtgacgtgccg
ccgtccctcaaggatgtggaactgcgcagcctcgacgtcggcctgctgcaggccggcgcg
agcatgaaaggcgaattcgaacagcgcctgcgccaggtcatcgaagacgtccaggcctcg
ccgaagccgatcatcctgtttatcgacgaagcccacaccctggtgggtgccggtggcgcc
gccggtaccggtgacgcggccaacctgctcaagccggccctggcccgcggcaccctgcgt
accgtggccgccacgacctgggccgagtacaagaagcacatcgagaaagacccggccctg
acccgtcgcttccaggtggtgcaagtggccgagccgtcggaagacaaggccctgctgatg
atgcgcggcgtggcttcgaccatggaacagcaccatcaggtgcagatcctcgacgaagcc
ctggaagcctcggtcaagctgtcccaccgctacatccccgcgcgccagttgccggacaag
tccgtgagcctgctggacaccgcctgcgcccgcgtcgccatcagcctgcacgcggtgccg
gccgaagtggatgacagccgtcggcgcatcgaagcgctggaaaccgagctgcagatcatc
gcccgcgaacacgccattggcgtggtcatcggcacacgccagacccagaccgaaagcctg
ctgagcgccgaacgcgagcgcctcgccgagctggaaagccgctgggccgaagagaaaacc
ctggtggacgaactgctcgccacccgagccaccctgcgcgaacgcgtcggtgtggtggac
agcgaggacgccagcgaagcttccgacaacgaaagccacgccctgcgcgagaaactggtg
gacctgcaacagcgcctgaccgccctgcaaggcgaaaccccgctgatcctgccgaccgtg
gattaccaggccgtggcctcggtggtcgccgactggaccggtatcccggtgggccgcatg
gcccgcaacgaactggaaaccgtgctcaacctcgaccagcacctgaagaaacgcatcatc
ggccaggaccatgccctgcagatgatcgccaagcgcatccagacctcccgcgccggcctc
gacaacccgagcaaaccgattggcgtgttcatgctcgccggcacctccggcgtgggcaag
accgaaaccgccctggccctggccgaagccatgtacggcggcgagcagaacgtcatcacc
atcaacatgagcgaattccaggaagcccacaccgtgtccaccctcaagggcgcgccaccg
ggctacatcggctatggcgaaggcggcgtgctgaccgaagccgtgcggcgcaaaccgtac
agcgtggtgctgttggacgaggtggaaaaagcccacccggacgtgcacgagatcttcttc
caggtgttcgacaaaggcgtgatggaggacggcgaaggccgggtgatcgacttcaagaac
accttgatcctgctgaccaccaacgccggcaccgagttgattgccgacgtctgcaagaac
ccgcaggacgtgcccgaacccgaggagatcgccaaggccctgcgccagccgctgctggag
attttcccaccggccctgctcggtcgcctggtgacgatcccgtactacccgctcagcgac
gagatgctcaaggccatcacccgcctgcaactcaaccgcatcaagaagcgcgtggagagc
acccacaaggtcgcgttcgactacgacgacgcggtgatcgacctgatcgtctcgcgctgc
accgaaaccgaaagcggcggccgcatgatcgacaccatcctgaccaacagcctgctgccg
gacatgagccgcgagttcctgacccgcatgctcgaaggcaaggccatggccggcgtgcgg
atcagcgcggtggataacgaattgcagtacgatttcagcgacgcggcctga
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