Paraburkholderia megapolitana: FNZ07_04545
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Entry
FNZ07_04545 CDS
T06515
Name
(GenBank) RHS repeat-associated core domain-containing protein
KO
K20276
large repetitive protein
Organism
pmeg
Paraburkholderia megapolitana
Pathway
pmeg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pmeg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FNZ07_04545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6443
Motif
Other DBs
NCBI-ProteinID:
QDQ80491
LinkDB
All DBs
Position
1:1065377..1073923
Genome browser
AA seq
2848 aa
AA seq
DB search
MAADSDNSQIPAIRSFQFDSSSVGDLRSSVNLFRGDINFTQTLLSMPGRRTGDNLDLSIA
LLYQSNVLQDATTWNLDAPTSTLGLGWSMPIPTIVLNGTGSLVAATRSYSYVSQSISTDL
AREPDNPFVLSLDGSLAALLGNGDTVPAAIVAAFGALGLPLSANTLVTLTGSSAWLLADG
DNQQLFNLALNGDDLDVFDGGESYQLVNYQFWKILYYPCYERWVIVNNGGLRQSFGGVTA
NTQQGYATAAGNSVEWGVRWSSGTDSSGAPVALWQGDSARTEGQVQYACAWHLCQVTNVW
GDSVSYRYNDWPRLSDGLLPTVEQRVGPDGLPYTKACYLTGMTDVFGRTVQLTYDDKEWS
NATPESPREYADPHKAVPNTNANAYQDQYETLYLQGVTVLDTSGATLFTFTLAYQPSSPA
GGAGSPVANVTSSQGELFGDTCKRFLTGITLTNASGDSLPGLAFDYYFDATGDGASPGAL
KSITYSQGAIATYSYTKQSLDICNRSYTVSPPSGGTFTGATPRVFFGDGYAVVTWYSPAN
GALSLQVYSWLGNWQLWQPTSDSVIYSNAGAGLTLDTLDVIACEDFFALSFVPGDGQNNT
TVYVFQKDNARPSQWVAATINGTQTGLNTPSLTYSGASGSVALEGGSTFLIAATTNAVNG
STSYDRVTWRWSDAAWTCESCPPQPQQLTVTACNEYYLLLDLQGNVSIFALDACLNWNAA
ATLQIPNFSASDPSDIALTPSDSLVLVSSLTFAGATEISYTLAIVQWDELYRPLLPVPSF
DFTDVMDSNFPISWIPSVVGNELVAVSGHVLRFNGATWLENDSLNVSYAPSGLQQRYTYG
PDYVAQILAYPNGGGDPAAQVLSFDPDTDCTTWTRAPVTPTQTLTNPTTFYATANWPSSG
GTDWLTLGQYLYYRNTACSWDNVMQRNPRADVQALVNQVLDGDGVYVLNSEAVIDEAPDF
LAYYVFDSAADSSDQVAATMLRNGRVSVKAQPFSGQRIYTSEEGDTGAGTSPGGMNMFVA
YPGADRDFDNASQIILHAYAGDAVEGNLIHYAVTGLAVDNGLGQTSAYSFVPDAHSAACD
PTGEVFKYYEATVYPGTSDPSQPAFGWTVNRYLNGLKVLDGADFYNMLDGQLHQQQTYDA
NGNLLAQSTTKWQVYPTRASSADDPQAPVLNLNGGFLCQTAQTSIEDGVTSTQHSRYVDN
GFSAPFSGQVVSSRSTTYGGTGQLETFTADTLFAYQVDETNVSAAMLATHRLSDVAQAVT
YWEREGGSRVVSQATASTFASFASAYGGDVQVPSKSGNFVWDGTGHVPFPFGDYQTGEIP
KGWLPSNFVLAYTPYGQPAQTRDPTGVVQSTQYSIGSTFAVALFTNASLADGECAYLGFE
SYESTNGWSINGCTPVSDDAHTGTASLSLGAAGEGSLSVGITPPNIDTTYLLGFWYKTPS
GFTSTTGTGFSVTVTVDGVAGEPLGAAFADTSGIWTYQTLGIPIKAGQQSVALDVAAANN
SSDAVLLDDIFVAPLLGKMSARIYDPSYRLLTATVDASGTTMRRLYNGFQRLTATTGADE
QVKTMSVAFLSREGNASNTFDASAPNADLSLSPADGGVLETFLNGDQWQQHWSASNYPGN
WNRTNGTLQHTATTSDTLSWQGGNSGHVGDATSTALYFDLVTNGTLAGPLGITFGSGYTI
AFDPSSGFSFAAPDGSTVQSPLGTPPNVPAQWLLVMGNSNVLFFGDGQLLFSASLACGKP
SVVSLSTGPNAFALSNLAMLAGPRMSVGFRDASGQKCQTHQWLGSDAVISAVISDAIGRT
VAITRLAPASFGSGATLPLLTFHTGFVDVNAFLASMQDSWVMTGDIADYYAGQSDGPVSR
SNDEGYPYYGYRFEASPRKRRLEQGVPGKDYAVHDLQETTPATRQTTQIGFGANTSDAFG
LPENYATQTVTSPVKNQLMSLRDTKGRNVAASISDETGAVSGQSLASVDFTASASNTSIS
EPNSFTTSPQSDSSAFASQLQRDGAGRTTQITDPNSGLTSIICDAACRLRFVQPSLDPND
VGFIYYRYDALGRTVEEGTVAQTWDVTTLQKKANDASWPHGDVPFTVVRSYHYDGDGNDP
TQIGRKTVALTFNQAPANVSGAQPVTVHEQFTYDFDGRVIAVTLAVDGQPSASGTIAYAY
NNLDQVLQITYPASSPLRNAFYGYDAAARVVSIGSSITTPTDIASYTYTADGDVELEVRN
NGALTGAFEYASPGWPASQSVTVQGANDAAFTLGYEYFANGYPQSRTLALAFDTPQTTQT
TYTYDAQGRVVTALVGDSSIGSEQIDQYDANGNIWSLTQDGSAAYAFENTAGTDQLSTLT
VDGGTPTSFVYNARGNLINTGSESIDYDPALNLVQGIATGDGSMAVRFAYNSFGQRVLKM
VSGAAQADITFSGLSRNPLTVQRDGTWSALVYGPTGLIAAVSDQCYFPLNDSAHTVFATV
NSQNQLVAQFAYRAFGSLASATGSSQDAVPFRFMGKEYDDETGLYNFGARLYSPDLRRFL
AADTARQFASPYLFVGNNPLVFGDPSGNKMTVGAQIGIGVGMAALAVAGLVLSFFTFGAA
AVVTATAEEGIADTLVTADLTAELTTETTDTTVAATTAAEPAATSTSSSIFNVTLRVPQE
FLGLAKAGTTVANFATQITTNTMFGVGTAGFQYDCRPGHEFTRKGFDEALAGGAVSGAIF
GVMSFGASLTAGPALKGVSNLLLRGTLKMIINVGEGITANDLTQIATNAIEHQPWSKGLA
QATWVGAAGGAPFGLGDILVNDSSEISDAISDRFGNSRRGEPAPAPVPGAQAQNVQAELQ
LARNDTNEVTGLLTGSSLNRSYGTMSVS
NT seq
8547 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggattccgacaattcgcagatccccgctattcgctcgtttcagttcgattca
agtagcgtcggggacctgcgcagcagcgtcaatctgtttcgtggcgacatcaatttcacg
cagaccttgctgtcgatgcccggacgccgcaccggcgacaacctcgatctgagcatcgcg
ctgctgtatcagagcaatgtccttcaggatgcaaccacctggaacctcgacgcgccgacc
agcacactcggcctcgggtggagcatgccgataccgacgatcgtgctcaacggtacgggt
tccctcgtcgctgccacgcgtagctacagctacgtcagccagagcatctccaccgatctc
gcacgcgagcccgacaatccgtttgtcctctcgctggacggctcgctagcggcgttgctc
ggcaacggtgacacggtcccggccgcgatcgtcgcagcattcggtgcactcggcctgcca
ttgtcggcaaacacactcgtcacgcttacgggttcatcggcatggctgctggccgacggc
gacaaccagcagctattcaatctcgcgctcaacggcgacgatctcgatgtgttcgacggt
ggagagtcgtaccagctcgtcaactatcagttctggaagattctttactatccctgctac
gagcgctgggtcatcgtcaacaatggcggcttgaggcagtcgtttggcggcgtgacggca
aatacgcaacagggctacgcaaccgcggcaggcaacagtgtcgagtggggtgtgcgctgg
tcgtcgggcaccgactcatcgggtgcacctgttgcgctgtggcagggtgacagcgcgcga
accgaaggacaggtccagtacgcgtgcgcctggcacctttgccaggtcaccaatgtatgg
ggcgactcggtcagctatcgctacaacgactggccgcgattgtccgatggtttgctaccg
accgtcgaacagcgcgtcggccccgacggcttgccctatacgaaagcgtgttacctgacc
ggcatgactgacgtattcgggcgaaccgtccagctcacttacgacgacaaggaatggagc
aacgccacgccggagagcccgcgcgaatatgcagacccgcacaaggccgtgccgaacacc
aacgcgaacgcttaccaggaccagtacgaaacgctgtacctgcaaggcgtcaccgtcctg
gacacgagcggcgcaacgctgttcacctttaccctggcgtaccaaccctccagtccggcg
ggcggcgcgggtagtcccgttgccaatgtgacgtcttcgcaaggcgaattgttcggcgac
acctgcaaacgttttctcaccggcatcacactcaccaatgcgagcggcgacagtcttccc
gggctcgcgttcgactactacttcgacgcgaccggggacggtgcgagcccgggtgcgctc
aaatccatcacgtacagccagggtgcgatagcaacgtacagttacacgaagcaatcgctc
gatatctgcaatcgctcgtacacagtttcgccgccttcaggcggaacattcaccggcgcc
acaccgcgcgtgtttttcggcgatggctatgccgtggtcacgtggtactcgccggcgaac
ggcgcgttgtcactgcaggtatacagctggctcggcaactggcaactgtggcaacccacc
agcgacagcgtgatctacagcaacgcgggcgccgggctcacgctggacacgctcgatgtg
atcgcatgcgaagatttcttcgcgctttcgttcgtgccgggcgacggccagaacaacacc
accgtgtatgtctttcagaaagacaatgcacgtccttcgcagtgggtagcggcaaccatc
aatggcacgcagaccggtctgaatacaccgagccttacctactccggagccagcggcagc
gtggcactggaaggcggcagcacgttcctgatcgccgccaccacgaacgccgtgaacgga
tcgacgtcctatgatcgcgtgacctggcgctggagcgatgcggcctggacatgtgaaagt
tgtccgccgcagccgcagcaactgacggtaaccgcctgcaacgagtactacctgctactc
gatctacagggcaacgtctcgatctttgcgctcgacgcctgtctcaactggaacgccgca
gcgacgctacagataccgaacttttccgcatccgatccgagcgatattgcactgacaccc
tccgactcactagtgcttgtcagcagtctgacttttgcgggcgcaacggagatctcctat
acgctggccatcgtccaatgggatgagttgtatcgcccattgctgcccgtaccgtcgttc
gactttaccgacgtgatggacagcaacttcccgattagctggattcccagcgtggtcggc
aatgagctcgtcgctgtctccgggcatgtgctgcgcttcaatggcgccacgtggctcgag
aatgacagcctgaacgtgtcatatgctccatctggcctgcagcagcgctatacgtatgga
ccggattacgttgcccagattcttgcgtacccgaacggtggaggcgacccagcggcgcag
gtactgtcattcgatccggacaccgattgcaccacgtggacacgtgcaccggtcacaccc
acgcagaccttgacgaatccgacgacgttttatgccactgccaactggccttcgagcggc
ggtacagactggctgacactcggacagtacctgtactaccggaacacagcgtgcagttgg
gacaacgtcatgcaacgcaatccgcgcgccgatgttcaggcgctcgttaatcaggtgctt
gatggcgacggtgtttatgtcctgaactcggaagcggtgatcgacgaagcgcctgatttt
ctcgcgtattacgtcttcgattccgcagccgatagcagcgatcaggttgcggccaccatg
ctgcgcaacggtcgggtatcggtcaaagcacaaccgttttccggacagcgcatctatacg
agcgaagagggtgacactggcgcaggaaccagtcccggtggaatgaacatgttcgtcgcc
tatccaggcgcagacagagatttcgacaacgcctcgcaaatcatcctgcacgcctatgcg
ggcgacgctgtcgaaggcaatctgattcactacgccgtcacaggtctcgccgtcgacaac
ggcctcggacaaaccagcgcatacagcttcgtaccggatgcgcattctgcagcgtgcgat
ccgaccggtgaggtcttcaagtactacgaggcgaccgtctaccccggtaccagtgatcca
tctcaaccggcgtttggctggacggtgaaccggtatctgaacggcttgaaggtgctcgac
ggtgccgacttctacaacatgctcgacgggcagttgcatcagcaacaaacctatgacgcg
aacggcaatctgctcgcccagtcgaccaccaaatggcaagtctatccgacccgcgcgtcc
tccgcggacgatccacaggcaccggttttgaacctgaatggcggcttcctgtgccagacc
gctcagaccagcatcgaggatggtgtgacaagcacgcagcactcgcgctatgtcgacaat
ggattttccgcaccgttctcgggccaggtcgtatcgagccgtagcacgacatatggcggc
acaggtcagctcgaaacgttcacggccgacacactcttcgcctatcaggtcgatgagacc
aacgtgtcggcggccatgctcgcaacgcatcgtttgagcgacgttgcgcaagccgtcacg
tactgggaacgcgaaggcggtagccgcgtggtctcgcaagccacggcgagcacgttcgcg
agctttgcctctgcgtacggcggcgatgtacaggtaccgtccaagtccggtaatttcgta
tgggacggcaccggtcacgtgccgtttccattcggggactaccagaccggtgagataccc
aaaggctggctgccgtcgaatttcgtgctcgcctacacgccatacggtcaacctgcgcag
acgcgggatccgaccggcgtcgtgcaatcgacgcaatacagcatcggctcgacgtttgcg
gttgcgctgttcaccaacgcgtcgctggcggatggcgaatgtgcgtatctgggcttcgaa
agttacgagtcgactaacggctggagcatcaacggctgcacgccggtgagcgacgatgcg
catactggtacggctagcctgagtcttggcgccgcaggggaaggatcgctatcggttgga
atcacgccgccgaacatcgatacgacctatctgcttggcttctggtacaagacgccgtcc
ggcttcacatcgactactggcaccggcttcagcgtgacagtcaccgtcgatggagtcgcg
ggtgagccgctaggcgcggcattcgccgacacgagcggcatatggacctaccagacgctc
ggcattccgatcaaggccgggcagcaaagcgtcgcgctggatgtcgcggcggccaacaac
agtagcgatgccgtactgctcgacgacatcttcgtcgcgccattactcggcaagatgtcg
gcgcgcatctacgatccgtcgtatcgcctgctcaccgcgacggtcgacgcgtcgggcacc
acgatgcgccgtctttacaacgggttccagcgtctgaccgcaacgaccggcgcggacgag
caggtaaagacgatgtcggtagcgtttctgtcgcgtgaaggaaatgccagcaataccttt
gacgccagcgcaccgaatgcggatctgtcgctgagccccgcggacggtggcgtactcgaa
acgtttctgaatggcgaccaatggcaacagcactggtcggcgagcaactatcctggcaac
tggaaccgtacgaacggcacgctgcaacacaccgccacgacttccgatacgctgagctgg
caaggcggcaatagcggtcatgtcggcgacgcgacgagcaccgcgctctacttcgatctg
gtgacgaacggcacgcttgccgggccgctcggtatcacgttcggttccgggtacacgatc
gccttcgatccttccagtgggttctcattcgccgcgccagatggcagcaccgtgcaaagc
ccgcttggcacgccacccaacgtgcctgcgcaatggctgctcgtcatgggcaacagcaac
gtgctgttcttcggcgatgggcaactgctgttcagtgcatcgcttgcttgcggcaaaccc
agtgtcgtttcgctgtcgaccggccccaatgcatttgcgctgtcgaatctggcgatgctg
gccggcccacgcatgagtgtgggcttccgcgacgcctccggacagaagtgccagacgcac
caatggctcggcagcgatgcggtcatctcagctgtaatctccgacgcaatcgggcgcacg
gtggccattacgcggcttgcgccggcgagcttcggcagcggcgcgacgctgccgctcctg
accttccatactggcttcgtcgacgtgaatgctttcctcgcatcgatgcaggacagttgg
gtcatgacgggcgatatcgccgattactacgccgggcaaagcgacggtcccgttagccgc
tccaacgacgaaggctatccctactacggttaccgcttcgaagcatcgccccgcaagcgc
cgcctcgaacagggtgtgcccggtaaagactatgcggtgcacgatctgcaggaaaccaca
ccggcaacgcgtcagacgacgcagatcggttttggcgcgaacaccagcgatgcattcggg
ttacccgaaaactacgccacgcaaacggtgaccagccccgttaaaaaccagttgatgtcc
ctgcgcgacacaaagggacgcaatgtcgctgcgagcatcagtgacgagacgggtgctgtc
tcaggacagagtctcgccagtgtggatttcactgcatcggcgagcaacacgtcgatcagc
gaacccaacagcttcacgacctcgccgcaatcggactcctccgcttttgcgtctcaactg
cagcgcgacggcgcgggtagaaccacgcagatcaccgatccgaacagcggtttgacgtcg
atcatttgcgatgccgcgtgccggctacgctttgtacaaccgtcactcgacccaaacgat
gtcggcttcatctactaccggtacgacgcgctcggccgcacagtcgaggaaggcaccgtc
gcgcaaacgtgggacgtgaccaccctgcagaaaaaagccaatgacgcgtcatggccacat
ggcgacgtaccgtttactgtcgttcgcagctaccactacgacggcgacggcaatgacccg
acgcaaatcggtcgcaagaccgttgcattgacgttcaatcaggcaccagcgaacgtcagt
ggcgcacagccggttacggtccacgaacagttcacatacgacttcgacggccgcgtgatt
gctgtcacgctcgccgtggacggacaaccgtcggcgagcggcacgatagcgtatgcgtac
aacaatctcgaccaggtactgcagatcacctatccggcctcgtcgccgctgcgcaatgcg
ttctatggctacgatgctgccgcccgggtcgtgagcataggttcgtcgatcacgacgcca
acggacatcgcgtcgtacacgtacacagcagatggtgatgtcgaactggaggtccgcaat
aacggcgcactaacaggtgcattcgaatacgcatcgccgggatggccggcctcgcaaagc
gtcaccgtgcagggcgcgaatgacgctgcatttacgctcggctatgaatacttcgcgaac
ggctatccacaaagccgcactctagcgctggcgttcgacacgccacaaacaacgcaaacc
acctacacatacgacgcccagggacgtgtcgtcacagcactcgtcggcgactcgtctatc
ggcagcgagcagatcgaccagtacgatgcgaacggcaatatctggtcgttaacgcaggac
ggtagtgcggcttacgcgttcgagaataccgccggtaccgatcaattgagcacgcttact
gtcgacggcggcacacccacttcgtttgtctataacgcacgcggcaatctgatcaacacc
ggtagcgaaagcatcgactacgatcctgcgctgaacctcgtgcaaggcatcgcgacgggc
gacggtagtatggccgtgcgctttgcctataacagcttcggccagcgcgtactcaagatg
gtcagcggcgctgcgcaggctgacatcacgttcagcggactgagccgcaacccactgacc
gtgcagcgcgacggcacctggtcggcgctcgtctacggcccgaccggactgatcgccgca
gtcagcgaccagtgctatttcccgctcaacgattccgcgcatacggtgttcgcgacggtc
aacagtcagaaccagcttgtcgcgcaattcgcctatcgggcattcggctcgctcgcttcg
gcgacaggttcgagtcaggacgccgtgccgttccgtttcatgggtaaggaatacgacgac
gagaccggactctataacttcggtgcgcgcctctactcacccgatctgcggcgctttctc
gcggccgataccgcgcggcaattcgcgagtccctacttatttgtcggcaacaacccgctc
gtatttggcgatccgagcggcaacaagatgaccgtcggtgcgcagatcggcattggtgtg
ggcatggcggcgctcgccgtcgccggcctcgtgctgagtttcttcacgttcggcgctgca
gcagtagtcacggcaacggctgaagaagggatagccgacaccctggtaacagcggatttg
accgccgaactaaccaccgaaacaaccgacacgaccgttgccgcaacaactgcagcggag
cccgctgcgacgtccacttcatcgtcgatattcaatgtcaccctgcgagtgccgcaagag
ttccttgggctcgccaaagcgggaaccacagtggccaacttcgccacgcagatcaccacc
aacacgatgtttggcgtcggtacggcaggttttcagtacgattgcaggccggggcacgaa
ttcacgcgcaagggtttcgatgaagcactcgccgggggcgctgttagcggggcaatattc
ggcgtgatgtcttttggcgccagtctgactgcgggtccggcactgaagggagtcagcaac
ctgttgctgcgcgggacgctgaaaatgatcatcaacgtgggtgagggcatcacggcgaac
gatctgacccagatcgcgaccaacgcaatcgagcaccagccatggagcaaggggcttgcg
caggcgacgtgggtcggtgccgcgggcggggcaccgttcggcctgggtgacatcctggtt
aacgacagttcggaaatttcggatgcgatctctgatcgctttggcaactcacggcgtggt
gaaccggcgccggcgccagtacctggcgcacaagcgcagaatgttcaggctgagttgcag
cttgcgcgcaatgatacaaacgaggtgaccgggttactgacgggttcgtcgttgaaccgg
tcctacggcaccatgtcggttagctga
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integrated database retrieval system
