Paraburkholderia megapolitana: FNZ07_06455
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Entry
FNZ07_06455 CDS
T06515
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pmeg
Paraburkholderia megapolitana
Pathway
pmeg03030
DNA replication
pmeg03410
Base excision repair
pmeg03420
Nucleotide excision repair
pmeg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FNZ07_06455 (polA)
03410 Base excision repair
FNZ07_06455 (polA)
03420 Nucleotide excision repair
FNZ07_06455 (polA)
03440 Homologous recombination
FNZ07_06455 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmeg03032
]
FNZ07_06455 (polA)
03400 DNA repair and recombination proteins [BR:
pmeg03400
]
FNZ07_06455 (polA)
Enzymes [BR:
pmeg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FNZ07_06455 (polA)
DNA replication proteins [BR:
pmeg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FNZ07_06455 (polA)
DNA repair and recombination proteins [BR:
pmeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FNZ07_06455 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FNZ07_06455 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QDQ80843
LinkDB
All DBs
Position
1:1530992..1533745
Genome browser
AA seq
917 aa
AA seq
DB search
MPEEQYLEAKLEGKTLLLVDGSSYLYRAYHALPDLRGPDGEPTGALYGIINMLRRMRKEV
TAEYSACVFDAKGKTFRDDWYPDYKANRASMPEDLVRQIEPIHVAVRALGWPLLMIDRVE
ADDVIGTLSTQAEKLGMKVIVSTGDKDLAQLVTDSVTLINTMTNETLDRAGVLAKFGVPP
ERIVDYLSLIGDTVDNVPGVDKCGPKTALKWLAQYDSLDGVIAHADEIKGAVGDNLRRAL
DFLPMARKLVTVETACDLTQHIASIEASLASRPEARTELRDVFARHGFKTWLREVETAEV
VEGPQIDVAPAQTVDVERHYDTVQTWEQFDAWFAKIDAAQLTAFDTETTSLDPMTAQLVG
LSLSVEPGYAAYIPVAHRGPDAPVQLPRDEVLAKLKPWLESPTKKKVGQHLKYDEQVLAN
YGIEMDGIEHDTLLESYVVESHRTHDMDSLALRHLGIKTIKYEEVAGKGAQQIGFDEVAL
DQAAEYAAEDADITLRLHLALYPQVTAEKGLEYVYREIELPTSRVLRKMERAGVLIDAEK
LRRQSNEIATRLVQLEGEAYELAGGEFNLGSPKQIGQIFFEKLQLPVVKKTPSGAPSTDE
EVLQKLAEDYPLPKLLLEHRGLSKLKSTYTDKLPRMVNAQTGRVHTNYAQAVAVTGRLAS
NDPNLQNIPVRTAEGRRIREAFIAAPGHKLVSADYSQIELRIMAHISGDESLLRAFAQGE
DIHRATAAEVFGVTPLEVNSDQRRIAKVINFGLIYGMSSFGLASNLGITRDAAKLYIDRY
FARYPGVAKYMDDTRASAKEKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGT
AADLIKLSMIAVQRWLDASPVGTRMIMQVHDELILEVPDSELAEVRKRLPELMCGVAALK
VPLVAEVGAGDNWEEAH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacagtacctggaagcgaagctggaaggtaagaccctgctattggtagac
ggttcgagctatctctaccgggcctaccacgcattgcccgatctgcgtggaccggacggc
gaaccgaccggcgcgctgtacggcatcatcaacatgctgcggcgcatgcgcaaggaagtc
actgcagagtatagcgcgtgcgtgttcgatgcgaagggcaagacgtttcgcgacgactgg
tacccggattacaaggccaaccgcgcgtcgatgcccgaagatctggtgcgccagatcgag
ccgatccatgtcgccgtgcgcgcgctgggctggccgctgctgatgatcgatcgcgttgag
gccgatgacgtgatcggtacgctcagcacacaggccgaaaagctcggcatgaaggtgatc
gtctccaccggcgacaaagacctcgcgcaactcgttaccgatagcgtcacgttgatcaac
acgatgacgaacgaaacgcttgatcgcgcgggcgtgctcgcgaagttcggcgtgccaccg
gagcggatcgtcgattacctgtcgctgatcggcgataccgtcgacaacgtgccgggcgtc
gacaagtgcggaccgaaaacagcgttgaagtggctcgcgcagtacgactcgctcgacggc
gtcatcgcgcatgcggatgaaatcaagggggcagtcggcgacaacctgcgccgcgcactc
gacttcctgccgatggcgagaaagctcgtcactgtcgaaaccgcctgcgatctgacgcag
cacatcgcatcgattgaagcgtcgcttgcatcgcggcccgaggctcgcaccgaattgcgc
gatgtgttcgcgcggcacggcttcaagacatggttgcgtgaagtcgagacggccgaggtc
gtcgaagggccgcaaatcgacgtggcaccggcgcaaaccgtcgacgtcgaacgtcactac
gacaccgtgcagacgtgggagcaattcgacgcgtggttcgcgaagatcgacgctgcgcag
ctcaccgcattcgataccgaaaccacttcgctcgatccaatgaccgcgcaactcgtcggt
ctgtcgttgtccgtggaaccgggttatgcagcctatattccggttgcacatcgcggaccc
gatgcaccggtgcaactgccgcgcgacgaagtgctcgcgaagctgaagccctggctagag
agtccgacaaagaaaaaagtcggccagcatttgaagtatgacgaacaggtgctcgctaac
tacggcatcgagatggacggcatcgagcacgacacgctgctcgagtcgtacgtggtcgaa
tcgcatcgcacgcacgacatggacagcctcgcgctgcgtcatctcggcatcaagacgatc
aagtacgaggaagtagcgggcaagggcgcgcagcagatcggcttcgatgaagtcgcactc
gatcaggccgccgaatacgccgcggaagacgccgacatcacgctgcgtctgcatctcgcg
ctgtacccgcaggtcaccgcagagaaaggcctcgaatacgtgtaccgggagatcgagctt
ccgacgtcgcgtgtgctgcgcaagatggaacgcgccggcgtgctgatcgatgccgagaaa
ctgcgccggcaaagcaacgagatcgcgacacggctcgtgcagctcgaaggcgaagcgtac
gaactggcgggcggcgaattcaatctcggttcgccgaagcagatcggccagatcttcttc
gagaagctgcaattgccggtcgtgaagaagacgccgagcggcgcgccttccaccgatgaa
gaagtgctgcagaaactcgccgaagactatccgctaccgaagctgctactcgaacatcgc
gggctttcgaagctgaagtcgacctacaccgacaaactgccgcgcatggtcaatgcgcag
acgggccgcgtgcatacgaactatgcgcaggccgtggcggtaacggggcggctcgcatcg
aacgatccgaatctgcagaacattccggtgcgcacggcagaaggccggcgcattcgcgaa
gcttttatcgcggcgcctggccacaagctcgtttccgccgactactcgcagatcgaactg
cgcatcatggcgcacatctcgggcgacgaatcgctgctgcgtgcgtttgctcaaggcgag
gacatccaccgcgcaacggccgccgaagtgttcggcgtgacgccgctcgaagtgaattcg
gaccagcgacgcatcgcgaaggtgatcaacttcggtttgatctacggaatgagttcgttt
ggtctggcatcgaatctcggcattacgcgcgatgcggcgaagctctatatcgaccggtat
ttcgcgcgctatccgggcgtggcgaaatacatggacgacacgcgcgcgagcgcgaaagag
aagggctacgtcgagaccgtgttcggtcggcggctgtggttgcccgaaatcaacggtggt
aacggcccgcgccggcaggccgcggaacgcgcggcgatcaacgcgccgatgcagggcacg
gccgccgatctgatcaagctgtcgatgatcgcggtgcagcgctggctcgacgcatcgccg
gtcggtacgcggatgatcatgcaggtccacgatgaactgatactcgaagtgcccgacagc
gaactcgccgaggttcgcaagaggctgcccgaactgatgtgcggcgttgctgcgctgaag
gtgccgctcgttgcagaagtcggcgccggcgacaactgggaagaagcacattga
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