Paraburkholderia megapolitana: FNZ07_15600
Help
Entry
FNZ07_15600 CDS
T06515
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
pmeg
Paraburkholderia megapolitana
Pathway
pmeg02020
Two-component system
pmeg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pmeg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FNZ07_15600
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FNZ07_15600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmeg03021
]
FNZ07_15600
Transcription machinery [BR:
pmeg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FNZ07_15600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_38
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QDQ82681
LinkDB
All DBs
Position
2:complement(485342..486859)
Genome browser
AA seq
505 aa
AA seq
DB search
MKASLQLRLSQHLALTPQLQQSIRLLQLSTLELQQEVAMAIAQNPLLENEDDWIASPLRV
AADGSLITQTQSTSAPESMNGPSSSTSSTSSSERSDDGEPRGVDEYNGLSNDSNSDASQW
NLDDYGRSGNASDDDDLPPLQIHESSTSLRDHLMAQLRVTQASPRDRALVTFLIESLDDD
GYLTATFEEILTDLPEELEVDVDELNAALALLHSFDPAGVGARSASECLRLQLVRLVATP
IRTLAIDIVAHHLELLAARDFTRLRKQLKANDDDLRDAHALIRSLEPFPGAAYGKAEADY
VVPDIMVRKTAQGWQAELNPEVVPKLRINHLYANILRNNRSDPGSGSLRQQLQEARWLIK
NIQQRFETILRVAQAIVERQKNFFVHGEIAMRPLVLREIADTLGLHESTVSRVTTGKYML
TPFGTLEFKYFFGSHVSTDTGGAASSTAIRALIKQLIGAENPKSPLSDSRIAELLAEQGF
VVARRTVAKYREALRIPAVNLRKSL
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccagcctccaactccgcctgtcgcagcatcttgcgctgacacctcaactgcaa
cagtccatccggctgctgcagctgtcgacgctcgaattgcagcaggaggtggcaatggcc
atcgcgcagaatccgttgctcgagaacgaggacgactggattgccagtccgttgcgcgtc
gcggcagatggttcgctgatcacgcagacgcagagcacatcggcaccggaatcgatgaac
ggcccctcgtcatcgacctcgtccacttcatcgagcgagcgtagcgacgatggcgaacca
cgcggcgtcgacgaatacaacggtctcagcaacgacagcaactccgacgcaagccagtgg
aatctcgacgattacggccgctcgggcaacgcatccgacgacgacgacctgccgccgctg
caaatccacgaatcgagcacttcgctgcgcgatcatctgatggcgcagttgcgcgttacg
caggcaagtccacgcgaccgcgcgctcgttacgttcctcatcgaatcgctcgacgacgac
ggttatctgaccgcaacgttcgaagaaatactgaccgatctacccgaagaactcgaagtc
gatgtcgacgaactgaatgcagcgctcgcgttgctgcacagtttcgatcccgccggagtc
ggtgcaaggtcggcatcggaatgcttgcgcctgcaactagttcgactcgttgcgacaccg
atccgtacacttgcaatcgatatcgtcgcgcatcacctggagttgctggccgcacgcgat
ttcacgcggctgcgcaagcagttgaaagccaacgacgacgacctgcgcgacgctcacgca
ctgatccgttcgctcgaaccgttccccggtgcagcgtatggcaaggccgaagcggattac
gtggtgcccgacatcatggtgcgcaaaaccgcacaaggatggcaggccgaactgaatcct
gaagtcgtgccgaaactgcgtatcaatcatctgtatgcgaacatcctgcgcaataaccgc
agcgatcctggcagcggttcactgcgccagcaactgcaggaagcacgttggcttatcaaa
aatattcagcagcgtttcgagacgatcctgcgggttgcgcaggctattgtcgaacgtcag
aagaatttttttgtgcacggcgaaattgccatgcgccccttggttttgcgggaaatagct
gatacgctggggttacacgagtcgacggtttcgcgtgtaacaaccggcaagtacatgctt
accccgtttgggacgcttgaatttaagtacttcttcggatcgcacgtttccaccgacacc
gggggcgcggcctcttcaacggccattcgcgcactcatcaagcaactgataggagcggaa
aacccgaaatctcctctttcagacagccgcatagccgaactgctggcagagcagggtttc
gtggtcgcacggcgtaccgtcgcgaagtaccgcgaagcgctccgaattccagcggtgaat
ctgcgcaagtctctgtag
DBGET
integrated database retrieval system
