Paraburkholderia megapolitana: FNZ07_19370
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Entry
FNZ07_19370 CDS
T06515
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pmeg
Paraburkholderia megapolitana
Pathway
pmeg03030
DNA replication
pmeg03430
Mismatch repair
pmeg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FNZ07_19370 (dnaE)
03430 Mismatch repair
FNZ07_19370 (dnaE)
03440 Homologous recombination
FNZ07_19370 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmeg03032
]
FNZ07_19370 (dnaE)
03400 DNA repair and recombination proteins [BR:
pmeg03400
]
FNZ07_19370 (dnaE)
Enzymes [BR:
pmeg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FNZ07_19370 (dnaE)
DNA replication proteins [BR:
pmeg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FNZ07_19370 (dnaE)
DNA repair and recombination proteins [BR:
pmeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FNZ07_19370 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
QDQ83358
LinkDB
All DBs
Position
2:1328068..1331664
Genome browser
AA seq
1198 aa
AA seq
DB search
MTPMSDPRFVHLRVHSEFSIADGIVRLDDIVAAAAKDGQGALALTDLGNAFGLVRFYQEA
RGKGVKPIAGCDVWITNPDDRDKPSRLLLLVKNQRGYLNLCELLTKAWLTNQYRGRAEVE
AGWLESGMGEGLLALSGAQYGDVGLAFAAGNTEAAKRNAQHWAKVFAGGFYIELQRCGQP
GSEAYVQQAVALAVALKLPVVATHPLQYMTSDDFTAHEARVCISEGDMLANPRRQRRFTT
EQYFRSQDDMTALFADLPSALANTVEIAKRCNLTLELGKPKLPLFPTPDGMSLDDYLVQL
SKDGLETRLQQLFPDAAEREQKRDTYYKRLDFECGTIIKMGFPGYFLIVADFINWAKNNG
VPVGPGRGSGAGSLVAYALGVTDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVI
QYVKEKYGADAVSQIATFGTMAAKAAVRDVGRVLDLGYNFTDGIAKLIPFKPGKHVTIAD
AMKEEPLLQERFDNEDEVRQLLELAQRVEGITRNVGMHAGGVLIAPGKLTDFCPLYTQGD
EGGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDPSKADWSLAQVPLDDPA
SFSILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVALYRPGPMDLIPSFCARKHG
REVVDYPDPRVETVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKPEEMAK
HRELFREGAATNGLTGEKADEIFDLMEKFAGYGFNKSHAAAYALLAYHTAWLKAHHPAEF
MAANMSLAMDDTDKVKILFEDCRTNGMAVLPPDINQSAYRFEPVAEPGGKRSKTIRYGLG
AVKGSGQSAIEEILRAREDGPFIDLFDFCNRIDRRIVNRRTVEALIRAGAFDTLHDNRAQ
LIASVSLAMEAADQASANAMQAGLFDMGDAPSQGHELIDEPAWPEKRKLQEEKGALGFYL
SGHLFDAYREEVRRFVRLKLSELKEGREKLVAGVIASLRTQMTQRGKMLIALLDDGTGQC
EVTVFNEQFEANKQLFKEDELLVVQGQARNDAFTGGIRFTVDTVMDLERARSRYARAVKV
QMNGNADAGALRRVLEAYCAGPDQVLAAPAPSASRGGGNGNGRSGGYGGGGGYGGNDGGG
RQRAPVQIPGGLAVQIVYRSEHAEGEVRLGDAWRVKPTDELLSALRGEFAGSSIEIVY
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccatgtcagatcctcgcttcgttcatctccgcgttcactccgaattctcgatt
gccgatggcatcgtgcgcctcgacgacatcgtcgcggcggcggccaaagacggtcagggc
gcgctcgcgctcaccgatctcggcaacgcattcggcctcgtccgtttctaccaggaagca
cgtggcaaaggcgtcaagccgattgccggctgcgatgtctggatcaccaatcccgacgac
cgcgacaaaccctcgcgcctcttgctgctggtgaaaaaccagcgcggctatctgaatctg
tgcgagctgctgaccaaggcgtggctcaccaatcaataccgcggtcgcgcggaagtcgaa
gcgggctggctcgagtcgggcatgggcgaaggcttgctcgccctgtcgggcgcgcagtac
ggcgacgtcggcctcgcgttcgcggccggcaatacggaagcggcgaagcgcaacgcgcag
cattgggcgaaggtgttcgcgggcggcttctatatcgaactgcagcgctgcgggcaaccg
ggcagcgaggcgtacgtgcagcaggccgtggcgcttgcggtggcgctgaagctgccggtg
gtcgccacgcatccgctgcagtacatgacctccgacgacttcaccgcgcacgaagcgcgc
gtctgtatttcggaaggcgacatgctggcgaacccacgtcgccagaggcgcttcacaacc
gaacagtatttccgcagccaggacgacatgacggcgctgttcgccgatctgccgtcggcg
ctggccaacaccgtcgaaatcgcgaagcgctgcaatctcacgctcgaactcggcaagccg
aagctgccgctgttcccgacgcccgacggcatgtcgctcgacgattacctcgtgcaactg
tcgaaggacggtctcgaaacgcgtctgcagcaactgtttcccgacgcagccgagcgcgag
cagaaacgcgacacgtattacaagcggctcgatttcgagtgcggcacgatcatcaagatg
ggcttccccggctacttcctgatcgtcgcggactttatcaactgggcgaagaacaacggc
gtgccggtcggcccgggtcgtggctcgggtgcggggtcgctggttgcgtatgcgctcggc
gtgaccgacctcgatccgctgcgctacaacctgctgttcgagcgcttcctgaatccggag
cgggtatcgatgcccgacttcgacatcgacttctgccagcacggccgcgatcgcgtgatc
cagtacgtgaaggaaaagtacggtgcggacgcggtatcgcagatcgcgacgttcggcacg
atggctgcgaaggcggcggtgcgcgacgtcggccgcgtgctcgatctcggctacaacttc
accgacggcattgccaagctgatcccgttcaagccgggcaagcacgttacgatcgccgac
gcgatgaaggaagagccgctgctgcaggagcgcttcgacaacgaagacgaagtgcgccag
ctgctggaactcgcgcagcgcgttgaagggatcacgcggaacgtcggcatgcacgcgggc
ggcgtgctgatcgcgcctggaaagctgaccgatttctgtccgctgtacacgcagggcgac
gaaggcggcgtcgtgagccagtacgacaaggacgacgtcgaagcggttgggctcgtcaag
ttcgacttcttgggcctgaccacgctgaccattctcgactgggccgaacggtatatccgc
aggctcgatccgtcgaaggccgactggtcgctcgcccaggtgccgctcgacgaccccgcg
tcgttctcgatcctcaagaaggccaacacggttgcggtgttccagctggaaagtcgcggc
atgcaaggcatgctgaaggacgcgcagcctgaccgcttcgaggacatcatcgcgctggtg
gcgttgtaccggccaggtccgatggatctgatcccgagtttctgcgcccgtaagcatggc
cgcgaagtggtcgactatccggatccgcgcgtcgaaactgttctgaaagagacctacggc
atcatggtctaccaggagcaggtgatgcagatggcgcagatcatcggcggttactcgctc
ggtggcgccgacttgctgcgtcgtgcgatgggcaagaagaagcccgaggaaatggccaag
catcgcgagctgttccgcgaaggggccgcgacgaacgggctgaccggcgagaaagccgac
gagatcttcgacttgatggagaagttcgcgggctacggcttcaacaagtcgcacgcggcc
gcgtatgccctgctcgcgtatcacaccgcatggctgaaggcgcaccatccggcggaattc
atggcggccaacatgtcgctcgccatggacgacaccgacaaggtcaaaatcctgttcgag
gattgccggaccaacgggatggcagtgctgccgcccgatatcaaccagtcggcctatcgc
ttcgagccggttgcggaacctggcggcaagcgctcgaaaaccatacgctacggtctcggc
gccgtgaagggcagcggtcagagcgcgatcgaagaaatcctgcgggcacgcgaagacggg
ccgttcatcgacctgttcgatttctgcaatcgcatcgaccggcgcatcgtcaaccgtcgc
acggtggaagcgctgatccgtgcgggcgcgttcgacacgctgcacgacaatcgcgcgcag
ttgatcgcctcggtgtcgctcgcgatggaagccgccgaccaggccagcgccaacgcgatg
caggcgggtctgttcgatatgggcgatgcgccgtcgcaaggtcacgagctcatcgacgag
cccgcatggcccgagaagcgcaagctccaggaagagaagggtgcgctcggcttctacttg
tcgggccatctgttcgatgcgtaccgggaagaagtgcgccgcttcgtgcggctgaagttg
agcgagctgaaagaaggccgcgagaagctggtagccggtgtgatcgcgtccctgcgcacg
cagatgacccagcgcggcaagatgctgatcgcgctgctcgacgatggcactggccagtgc
gaggtcaccgtcttcaacgaacagttcgaggcgaacaagcaactcttcaaggaagacgag
ctgctcgtcgtccaggggcaggcgcgcaacgacgcgttcacgggcggcatccgtttcacc
gtcgataccgtgatggatctagaacgcgcgcgcagtcgttatgcgcgggctgtgaaggtg
cagatgaacggcaatgccgatgcgggtgccttgcgccgcgtgctcgaagcgtattgcgca
ggtcccgaccaggtgcttgccgcgcccgcgccgtccgcatcgcgcggcggcggaaacggc
aatggccgtagcggcggttacggtggagggggaggctacggcggcaacgacggcggtggc
cggcagcgcgcgcccgtgcagatacctggcggcctcgcggtgcagatcgtttatcgcagc
gaacacgcggaaggcgaagtccgccttggcgatgcgtggcgcgtcaaacccaccgacgaa
ctgctgagcgcattgcgcggagagtttgccggcagctcgatcgaaatcgtgtactga
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integrated database retrieval system
