Paraburkholderia megapolitana: FNZ07_20195
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Entry
FNZ07_20195 CDS
T06515
Name
(GenBank) type IV secretion protein Rhs
Organism
pmeg
Paraburkholderia megapolitana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
PAAR_motif
TEN_YD-shell
DUF4595
Motif
Other DBs
NCBI-ProteinID:
QDQ83505
LinkDB
All DBs
Position
2:1504572..1508987
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AA seq
1471 aa
AA seq
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MSLLAAARVQDTFTHTSLLGQLLKVVATVGAGLLVGLAIGAAAAFIVGTGGLGAVILTAV
VGAVISHVVNDITKEATGSDSLEGYLSEKAGELIDSLIPGNVKGSIATGSTDVFVNSLGA
ARAAGVPAPPLPPGVEPQSIADMFTPVDQDMVACQNHPTPKGEYLAEGSASVFINGRPAS
RIKDSTTCEGKINTGSTNVSIGGERLRVREVTSEMPPWLATIAKYAGLAIAICQALKGEG
SLLSKLACFGMNFAINVAADKLVGAAMSGRMGNPVHMPTGAKILDGNEDLDFVLDAPVPI
VWQRFYSSLDPRMERPLGRGWNLPYAVELQLGVGKEHPHLWIDAQGRRTPVPDLQPGQKY
FNRSEGLTFACTDGGHWMIEQADGTCFDFGMPQPDVPVQILSPVVFEDRNANRLYFYYDG
QGRLNELTTIAGHRVQIEYDGLHQGRMSRVMLHAGGTTECLVSYTYSERGQLASVSDGEG
CERRRFDYDAAGRMTMHRLPGGKTAYYAWEEFDRKELAEESGLVDREARVVEHWTDDGER
YRFTYDFAQQTTRVTDHLGRTQQCEWNADYLVTAHTNAIGHTWRFDWNAERGLAGFTEPN
GATTRLRYDDERGLPTELTNALDQTTRFTWHPLWMDLEKKTLADGRQWQFEFDMRGNVVA
GIDPLGQRTEFRLNRYGRPVAIVDARGGIVQFGWDRYQRMIARTDCSGITTRAEYDARGR
MSALTDALGHTTRYRHDDRDRVVHVLYADGSEQRRNWSLADALTSFTDGNGHTTAFAFDA
AGRVASRTDANGHQIDLEYDPAGNLRTLYNEVRDSYRFAYDAADRLIEQIAPDGVRVEYQ
RDARGASIRVTQAAGTPEQITLEFERDILGRLTGKRTPETATTYDYDETGRIVRLAREHL
DGRPMDTVTFAYDELDRVVAETVEAVGDDGQSTLTELVHEYDALGNRLGTALPNGRTMNW
LYYGSGHLHQISSNGETVCDFERDRLHREVSRTQGTQTLTTTYDSLSRKVGQWTGDAQHA
PASWAAFGSRQDVLRKAFAYDRGGELTGRIDPLSGEQTYRYDPAGQLLESSLAAGSTNAG
AQGVLAEQFAYDAASNLRPVGLPARVEGNRLLMRGDQRYRYDAHGRLVEKLTGGHTVQRL
KYNAEHQLIEVGTTRHGVEQAVRFSYDLLGRRTTKRDTFGLTHFVWDGLRLAQERRGHQV
VTYLYEGESYVPLARIDAVNDDSQWLWRLYHEGEKDRLEAEAKPEARIYYFHTNASGAPE
ELASGDGQVVWRTRYRAWGNTVLQEYAPEFQANPVGDVMQPLPQTLRLQGQYEDLETGFC
YSTFRYYDPDAGRFITPDPIGLAGGLNQYRYAPNPLSWIDPWGLSCEIFKTKSRNEALQQ
AQEFAQVPRLSRGGEDIGMNELNPSSRGMNWLEMKKSGATKLGRTNPDGKNYWFEHPDGH
SDAGEPGIPEHHASGHVHAVNPQGEERVFTW
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcctcgctgccgcccgggtgcaggacaccttcactcacacttcgctgctgggg
cagttgctcaaagtcgtggctactgtcggtgccggcttgctggtcggtctcgccattggc
gcggctgcggcgtttattgtcggaacgggcgggctgggggccgtgatacttaccgcggtt
gtgggtgcggtgatttcccatgtcgtcaatgacatcacgaaggaagcgaccgggtcggac
tctctggaaggctatctatcggagaaagcgggcgagctgatcgatagcctgattcctggc
aacgtaaagggcagcattgctacggggtcgaccgatgttttcgtgaacagcctcggcgct
gcacgtgccgcaggcgtgccggcgccgccgctgccgccaggtgtcgaacctcaatccatc
gccgatatgttcacgccggtcgatcaggacatggtggcgtgccagaaccatccgactccg
aagggcgagtatctggccgagggatcggcgagcgtttttatcaatggcaggccggcgtcg
cggatcaaggattcgacaacttgtgaaggcaagatcaacaccgggtcgactaacgtcagc
attggcggcgagcggttgcgcgtgcgcgaggtgacgagcgagatgccgccgtggcttgcg
acgattgcgaagtatgcggggctggcgattgcgatatgccaggcgttgaagggcgaagga
tcgctgctcagcaagctcgcctgcttcgggatgaacttcgcgatcaacgtggcggccgac
aagctcgttggtgcggcgatgtcggggcggatggggaatccggttcatatgccgaccggc
gcgaagattctcgatggcaatgaagatctggattttgtgctggatgcgccggtgccgatt
gtgtggcagcggttctattccagtctcgatccgcgtatggagcggccgcttggtcgtggg
tggaacttgccgtatgcggtcgaactgcaactgggggtgggaaaagaacatccgcatctg
tggatcgacgcgcaaggacgacgtacgccggttcccgatctgcaaccggggcaaaagtat
ttcaaccggagcgaagggctgacgttcgcgtgtaccgacggcggccactggatgatcgag
caggctgacggtacctgtttcgatttcggtatgccgcaaccggatgtgcctgtgcagata
ctgagtcccgttgtgttcgaggatcgcaacgcgaaccggctgtacttttactacgatgga
caaggccgtctgaacgaactgacgacgatagcgggccatcgcgtgcagatcgaatacgac
ggactgcatcaggggcggatgtcgcgtgtgatgttgcatgcggggggcacgactgagtgc
ctcgtgagctacacgtattctgagcgtgggcagcttgcgagtgtgtccgatggtgaaggc
tgcgagcggcggcgcttcgattacgacgcggcgggtcgtatgaccatgcaccggttaccg
ggtggaaagacagcgtactacgcgtgggaagagttcgaccgcaaagagcttgctgaagaa
agtggtctggtcgacagggaggctcgtgttgtcgaacactggacagatgatggtgagcgt
tatcggttcacgtacgatttcgcgcaacagacgacacgagtaacggaccatcttggccgc
acccagcagtgcgagtggaatgcggattacctggtgactgcgcataccaatgcgattggg
cacacctggcgctttgactggaatgcggagcgtgggctggctggatttacggaaccgaac
ggtgctacgacgcggctgcgttatgacgatgagcgcgggctgcctaccgagctgaccaat
gcgctcgatcagacgacgcggttcacgtggcatccgctctggatggatctggaaaagaag
accctggcggatggacggcaatggcagttcgagttcgacatgcgcggcaatgtcgttgcc
gggatcgatccgcttggacaacgtacggaatttagactcaatcgctatggccgtccggtg
gcgatcgtggatgcgcgcggcgggatcgtgcagtttgggtgggatcgatatcagcggatg
attgcgcgcacggattgttcgggcatcacgactcgcgccgaatatgacgcacgtggacgg
atgagcgcgctgaccgatgcgttgggtcacacgacgcgttatcgtcacgacgaccgcgac
cgggtcgttcatgtgctctatgcagatgggagcgagcagcgtcgtaactggtcgctagcg
gatgcactgacgtcgttcaccgatggcaacggacatacgactgcgttcgcattcgatgcc
gcagggcgagtggcgtcgagaaccgatgcgaacggtcatcagatcgacctcgaatacgat
ccggccggcaacctgcgcacgttgtacaacgaggtgcgtgacagttaccggtttgcgtac
gatgcggccgaccgtcttatcgaacagattgcgccggacggggtgcgtgttgaatatcag
cgcgatgcaaggggcgcgtcaatacgggttacgcaggcggcaggtacacccgagcagata
acgctcgaattcgagcgcgacatactggggcgcctgacaggcaagcgtacgcctgagacc
gcgactacatacgactacgacgagacggggcgtatcgtgcggcttgcgcgcgaacatctc
gatggccgcccaatggatacggtaacgtttgcgtacgacgaactggaccgggtcgtcgcc
gagactgtggaggcggtaggtgacgatgggcaatccacgctcaccgaactggttcacgaa
tacgacgcgttgggcaatcgtcttggcacggcgttgccgaacggtcgcaccatgaactgg
ctgtactacggcagcggccatttgcaccagatcagctcgaatggcgagacggtgtgcgac
ttcgaacgagacagactgcatcgtgaagtgagccggacgcagggcacgcagacgctcacg
acaacctacgacagtttgtcgcggaaggtgggtcaatggacgggcgatgcgcagcatgca
cctgcgtcctgggcggcgttcgggtccaggcaggacgtgctgcgcaaggcattcgcctac
gaccgaggtggcgaactgacgggccgcatcgacccactaagcggcgagcaaacctatcgt
tacgatccggcgggacagttactcgagagcagccttgcggccggcagcacaaacgccgga
gcgcaaggtgtccttgccgagcagtttgcatacgatgccgcatcgaacctgcgtccagtt
ggactgcccgcacgcgtcgaaggcaatcgcctgctgatgcgcggggaccagcgatatcgt
tacgatgcgcatggtcggcttgtcgagaagttgacgggtgggcacacggtgcagcgcttg
aaatacaacgcagaacaccagttgatcgaggtcggcacgacgcgtcacggcgtggaacag
gcggtgcgtttcagttacgacctgcttgggcgacggaccacgaagcgcgatacgttcgga
ctgacgcatttcgtctgggacggcctgcgacttgcacaggaacgccgtgggcatcaggtg
gtgacgtacctgtacgaaggcgaaagctatgtaccgctggcacggatcgatgcggtcaac
gacgacagtcagtggctatggcggctttaccacgaaggtgaaaaagaccggttggaagcc
gaggcgaaacctgaggccagaatctactacttccatacgaacgcgagcggtgcgccggaa
gagttggccagcggcgatggtcaggtggtgtggagaacgcgctatcgggcgtgggggaac
accgtgctgcaggagtatgcgccagaattccaggctaatccggtgggcgacgtgatgcaa
ccgcttccgcagacgttgcggttgcaggggcagtatgaggatctggagacagggttttgt
tacagcacgtttagatactatgatccggatgccgggcggtttattacgccggatccgatt
gggttggcgggagggctgaatcagtatcggtatgcgcctaatccgctcagctggatcgac
ccttgggggttgagttgtgagatttttaaaactaagagcaggaatgaagctttgcagcag
gctcaggagtttgcgcaagtgccgaggctctccaggggcggagaggatattggaatgaat
gagctgaatccgtccagtcgtggaatgaactggctcgaaatgaaaaaatctggagcaacg
aaattgggtcgcaccaatccggatggaaaaaattattggtttgaacatccggatggccac
tccgatgctggggagcctggtattcccgagcatcatgcaagcgggcatgtacatgcggtt
aaccctcaaggagaggaacgtgtctttacgtggtga
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