Paraburkholderia megapolitana: FNZ07_21240
Help
Entry
FNZ07_21240 CDS
T06515
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pmeg
Paraburkholderia megapolitana
Pathway
pmeg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FNZ07_21240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmeg03400
]
FNZ07_21240
Enzymes [BR:
pmeg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FNZ07_21240
DNA repair and recombination proteins [BR:
pmeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FNZ07_21240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
SH3_13
Helicase_RecD
RecD_N
SLFN-g3_helicase
AAA_22
DEAD
T2SSE
UvrD_C
MukB
CbiA
Motif
Other DBs
NCBI-ProteinID:
QDQ83686
LinkDB
All DBs
Position
2:1733914..1736082
Genome browser
AA seq
722 aa
AA seq
DB search
MSASDTSFPMADFTLPTPVDFSTALADGFARRIATLTRRLGATPASMRWAARAAFAASRA
TAEGHVCVPLSTLAHRYAAPLDLIHAALFDSGVVSDGSQDASALRPLVVDAEGRLYLARY
YDYERSLARLLVAHARAARSAGIAGIDPALPSASPDAHALHARLSRYFGPVLEEGVDWQR
VAVATALSSGLTIVSGGPGTGKTTTVVGVLACLLDMHADLRIALAAPTGKAAQRMQEALL
ARAGSLPPELAARLPQTSYTLHRLLGAGPGGRFRHHRDNPLPYDVVVVDEASMIDVAMAA
HLLDAIAPHTRLVMLGDKDQLAAVEAGAVFAELSARPSFSALGLDAIAAALAIDVATLTA
ALPRADDRHQTEASSEDGWDALPPPDADIPMWLGDEAEPWWPAEHEDLDTVPLPTDDLTY
STTGSESLYTQKPVDAAHDPLADCVVWLERNYRFGLESAIGRLSLAIRRGATQAAFDVLT
ADTSPQSDRAAVLHEDAEPGLSERTVTRLATGFAPYSAALRNALAEATPDPLPLFDALNR
FRILCATRSGPRGVEQLNAAMAAQVRRSAHVPLAVGAQWFAGRPVMVARNDYALGLFNGD
IGVTLPGPGGALRVYFRSGDGSVRAVSPAALPPHDTAFALTVHKSQGSEFEHAVLVLPSA
FSRVLSRELVYTAITRARERVEVIGSRAVLAQAIATPTRRDSGLAARIAATVDEAGSTQA
NR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgagcgatacgtcgttccccatggccgacttcacgttgcccacacccgtcgac
ttcagcacggcgctggccgacggtttcgcgcgacgcattgcgacgctgacgcgccgcctc
ggcgcgacgccggcaagcatgcgctgggctgcgcgcgccgcgtttgccgcgagccgcgcg
acggccgaaggtcatgtctgcgtgccgctgtcgacgctcgcccatcgttatgccgcgccg
ctcgatctgattcatgcggcgttgttcgatagcggtgtggtcagcgatgggtcgcaggac
gcgtcggcgttgcggccgcttgtcgtcgatgcggaggggcggctgtatctcgcacggtat
tacgactacgagcgcagtcttgcccgtttgctggtcgcgcatgcgcgagcggcgcgcagc
gctgggattgccggcatcgatcccgcgcttccgagcgcatcgcccgacgcgcacgcactg
catgcgcgcttgtcgcgctacttcgggccagtgcttgaagagggcgtcgactggcagcgc
gttgcggtggcgacggcgctatcgagcgggctgacgatcgtcagcggcgggccgggtacc
ggcaagacgacgacggtcgtgggtgtgctcgcatgtctgctcgatatgcatgccgatctg
cgcatcgcgctcgcggcaccgacgggcaaggccgcgcagcgcatgcaggaagcgctgctg
gcacgcgcgggcagcttgccgcccgaactggccgcgcgcttgccgcagacttcgtacacg
ctgcaccgtctgcttggcgcggggccgggtggacgctttcggcatcatcgggacaacccg
ttgccgtacgacgtggtggtggtcgacgaagcatcgatgatcgacgttgcgatggcggcg
catctgctcgatgcgatcgcaccgcacacgcggctcgtgatgctcggcgacaaggaccag
cttgccgcggtcgaggccggtgcggtgttcgccgaactgagtgcgcgaccgagtttcagc
gcgcttgggctcgatgcgattgcggcggcactcgccatcgatgtggcgacgctgacggcc
gcactgccgcgcgccgacgatcggcatcagacagaggcttccagcgaagatggctgggat
gcactgccgccgccggatgccgatataccgatgtggctcggcgacgaagcggagccatgg
tggcctgcggaacacgaagacctcgataccgtgcccctgccaaccgacgatctcacttac
tccacaaccggtagcgagagcctgtacacccagaaacccgtcgatgcagcacacgacccg
ctcgccgattgcgtcgtatggctcgagcgcaattaccgctttgggttggagtcggcgatc
gggcggttgtcgctggcgattcgccgcggcgcgacccaggcagcattcgacgtcctgacc
gcggacacatcgccacagtcagaccgcgccgcggtacttcacgaggacgcggagccgggc
ctgagcgaacgcaccgtcacgcggctcgcaacaggtttcgcgccgtattcggcggcactg
cgcaacgcgcttgccgaagcgacccccgacccgctgccgctcttcgacgcgctaaaccgc
tttcgcattctgtgtgcgacgcgcagcggtccgcgcggcgtcgaacagttgaacgcggcg
atggcggcccaggtgcgccgttcggcgcatgtgccgctcgccgtcggcgcgcaatggttc
gctggccggccggtgatggtcgcgcgtaacgactacgcgctgggtctgttcaacggcgac
atcggcgtgaccttgccggggccgggtggcgcattgcgcgtgtatttccgttccggcgac
ggcagcgtgcgagcggtttcgccggccgcgttgccgccgcacgatacggccttcgcgctg
accgtgcacaagtcgcagggctccgagttcgagcatgcggtgctagtgttgccgtcggcg
ttcagcagggtgttgtcgcgtgagctggtctacacggcgatcacgcgggcgcgcgaacgc
gtcgaggtgatcggttcgcgtgcggtgctggcgcaggccatcgcgacgccgacccggcgc
gattcggggttggctgcacgcattgccgctaccgtcgatgaagccggttctacgcaagcg
aaccggtaa
DBGET
integrated database retrieval system
