Paraburkholderia megapolitana: FNZ07_21330
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Entry
FNZ07_21330 CDS
T06515
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pmeg
Paraburkholderia megapolitana
Brite
KEGG Orthology (KO) [BR:
pmeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmeg03016
]
FNZ07_21330 (truB)
Enzymes [BR:
pmeg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FNZ07_21330 (truB)
Transfer RNA biogenesis [BR:
pmeg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FNZ07_21330 (truB)
Prokaryotic type
FNZ07_21330 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QDQ83704
LinkDB
All DBs
Position
2:1753897..1754886
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AA seq
329 aa
AA seq
DB search
MNGPERAGRGPERPRVPRRVLDGVLLLDKPLGLSSNDALIRAKRLYLAKKAGHTGTLDPL
ASGLLPLCFGEATKFSQDLLEADKTYEATMRLGIRTTTGDAEGETLETRDVACDEPAVLK
ALAGFRGDIVQVPPMYSALKRDGKPLYEYARAGQVVEREARPVTIHALELLACALPDVTF
RVTCSKGTYVRTLAEDIGESLGCGAHLVALRRTAVGALTLEHAVTLDALSDADASARDAW
LQPVDALLSTFPAVYLDEESARRFLHGQRLRLSELPQASNTAVASSESALNLPPDLPRVR
VYTDGKRLLGVAKMIDGVLAPDRLVVTAS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaacggacctgaacgtgctggacgtggacctgagcgtcctcgcgtgccgcggcgtgtg
ctcgacggcgtgctgctgctcgacaagccgctcggactgtcgagcaacgacgcgctgatt
cgcgcaaagcgcctctatctggcgaagaaggccggtcacaccggcaccctcgacccgctc
gcctcgggcctgctgccgctctgctttggcgaggccacgaaattctcccaggatctgctc
gaagccgacaagacctatgaggcgacgatgcggctcggcatccgcacgaccacgggcgac
gcggaaggtgaaacgctggagacgcgcgacgttgcgtgcgacgaaccggcggtactcaaa
gcactggcgggttttcgcggcgatatcgtgcaggtgccgccgatgtattcggcgctcaag
cgcgacggcaaaccgttgtacgaatacgcgcgggcggggcaggtggtcgagcgcgaggcg
cggccggtcacgatacacgcgcttgagctgctggcgtgcgcgttgcccgacgtgacgttt
cgcgtgacctgcagcaagggcacttacgtgcgtacgcttgccgaagacatcggcgagtcg
ctcggctgcggcgcgcatctggttgcgttgcggcgtacggcggtcggtgcgctgacgctc
gaacatgcggtgacgctcgacgcgttgtccgacgctgacgcaagcgcacgtgatgcgtgg
ctgcaaccggtcgatgcgctgctgtcgacgtttcccgccgtttacctcgatgaagaatcc
gcgcggcgcttcctgcatggacagcgcttgcggttgagcgagttaccgcaggccagtaac
actgctgtggcgtcgtcggagtctgcgttgaatcttcctcccgaccttccacgtgtgcgc
gtctacacagatggcaagcgactactcggcgtcgcgaagatgatcgatggcgtgctggcg
ccggaccggctggtcgtcacggcgagctaa
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