Paraburkholderia megapolitana: FNZ07_22355
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Entry
FNZ07_22355 CDS
T06515
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pmeg
Paraburkholderia megapolitana
Brite
KEGG Orthology (KO) [BR:
pmeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmeg03009
]
FNZ07_22355 (rimO)
Enzymes [BR:
pmeg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FNZ07_22355 (rimO)
Ribosome biogenesis [BR:
pmeg03009
]
Prokaryotic type
ribosomal protein modification factors
FNZ07_22355 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QDQ86004
LinkDB
All DBs
Position
2:1990565..1991944
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AA seq
459 aa
AA seq
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MESNPKPVSPPKVGFVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVVNTCGFID
EAVQESLDAIGEALTENGKVIVTGCLGAKKSASGSGLIEEVHPKVLAVTGPHALGEVMQA
VHNHLPKPHDPFVDLVPAAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVAE
VMLEAENLFRSGVKELLVISQDTSAYGVDVKYRTGFWNGRPLKTRMTDLVGALGELAAQY
GAWVRLHYVYPYPSVDEVIPMMAEGPLKGHVLPYLDVPFQHAHPEVLKRMKRPANAEKVL
ERVRAWREICPDLTIRSTFIAGFPGETEAQFETLLDFIREAELDRVGCFAYSPVEGASAN
ELDGALPDEVREARRARFMEVAEEVSAQRIARKVGKTLKVLVDELNAEGGVGRTAADAPE
IDGVVYIEPAKKASKRYKVGDFVSVKITGADGHDLWGEV
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ctggaatccaatcccaagcccgtttccccgccgaaagtggggttcgttagcctcgggtgc
cccaaagccctggtcgactcggagcagatcatcacgcagctgcgcgccgaaggctatgaa
atttccggtacctacgacggtgccgatctcgtcgtggtcaacacctgcggcttcatcgac
gaagccgtgcaggaaagcctcgatgcgatcggcgaagcgctgaccgagaacggcaaggtg
atcgtgaccggctgcctcggcgcaaaaaagagcgcgagcggttcgggtctgatcgaagaa
gtccatccgaaggtgctggccgtgaccggcccgcacgcgctcggcgaagtgatgcaggca
gtgcataaccatctgccgaagccgcacgacccgttcgtcgatctcgtgccggccgcgggc
atcaagctcacgccgcgccactatgcctacctcaagatctccgaaggctgcaatcaccgc
tgcacgttctgcatcatcccgtcgatgcgcggcgatctcgtctcgcgcccggttgccgag
gtgatgctcgaagcggagaacctgttccgctcgggcgtgaaagaactgctcgtcatctcg
caggacacgagcgcatacggcgtcgatgtgaagtaccgcaccggtttctggaacggccgc
ccgctgaagacgcgcatgaccgatctggtcggtgcgctcggcgaactcgccgcgcagtac
ggtgcgtgggtccgtctgcactacgtatatccgtatccgagcgtcgacgaagtgattccg
atgatggccgaaggcccgctgaagggccacgtgctgccgtatctcgatgtgccgttccag
cacgcgcatcccgaggtgctcaagcgcatgaagcgtcccgcgaacgcggaaaaagtgctg
gagcgcgtgcgtgcgtggcgcgagatctgcccggatctgactatccgcagcacgtttatc
gctggctttccgggcgaaaccgaagcgcagttcgagacgttgctcgactttattcgcgag
gccgaactcgatcgcgtgggatgctttgcctattcgccggtggaaggcgcgagcgcgaac
gaactcgacggtgcgttgcccgacgaggtgcgtgaagcgcgtcgcgcgcgcttcatggaa
gtcgcagaagaagtgtcggcgcagcgtatcgcccgcaaggtcggcaagacgttgaaggta
ctcgtcgatgagttgaatgcagaaggcggcgtgggccggaccgcggccgatgcgccggag
atcgacggcgtggtgtatatcgagccggcgaagaaagcatcgaagcgctacaaggtcggc
gatttcgtgtcggtgaagatcaccggtgcggatggccacgatctgtggggcgaggtctag
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