KEGG   Paraburkholderia megapolitana: FNZ07_22560
Entry
FNZ07_22560       CDS       T06515                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
pmeg  Paraburkholderia megapolitana
Brite
KEGG Orthology (KO) [BR:pmeg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmeg03032]
    FNZ07_22560
   03036 Chromosome and associated proteins [BR:pmeg03036]
    FNZ07_22560
   03400 DNA repair and recombination proteins [BR:pmeg03400]
    FNZ07_22560
DNA replication proteins [BR:pmeg03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    FNZ07_22560
Chromosome and associated proteins [BR:pmeg03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    FNZ07_22560
DNA repair and recombination proteins [BR:pmeg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      FNZ07_22560
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 UBA_HYPK HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: QDQ83925
LinkDB
Position
2:2041823..2042095
AA seq 90 aa
MNKTELIDHIAQQADISKAAAGRALDAVIGGVKGTLKTGGSVTLVGFGTFAVGKRTARTG
RNPRTGAAIKIKAAKVPKFKPGKALKDALN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaaaacggaattgatcgaccatattgcgcagcaagccgacatctccaaagcagcg
gcgggacgcgcgctcgatgcggtgatcggcggtgtcaaagggacattgaaaacgggcggt
tcggtcacgctggtcggcttcggtacgttcgccgtgggcaaacgtaccgcgcgtaccggg
cgcaatccgcgcacgggcgccgcgatcaagatcaaggccgccaaggtacccaaatttaag
cctggcaaggcactgaaagatgcgctaaactag

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