Paraburkholderia megapolitana: FNZ07_26950
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Entry
FNZ07_26950 CDS
T06515
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pmeg
Paraburkholderia megapolitana
Pathway
pmeg03420
Nucleotide excision repair
pmeg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FNZ07_26950
03430 Mismatch repair
FNZ07_26950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmeg03400
]
FNZ07_26950
Enzymes [BR:
pmeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FNZ07_26950
DNA repair and recombination proteins [BR:
pmeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FNZ07_26950
MMR (mismatch excision repair)
Other MMR factors
FNZ07_26950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QDQ84704
LinkDB
All DBs
Position
2:complement(3075122..3077473)
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AA seq
783 aa
AA seq
DB search
MPDLLANLNPEQHAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQQGYASPMTILAVTF
TNKAAREMMSRLSALLPIDTRGMWIGTFHGLCNRMLRAHYRDAALPSTFQILDTADQLSA
IKRLMKGLNIDDEKYPPKNLQYFINNAKEQGLRPKDVDATDNFNRKFVELYEAYDQQCQR
EGVVDFPELLLRCYELLAHNPPLRAHYQARFKHILVDEFQDTNKLQYAWLKMLAGESNAI
FAVGDDDQSIYAFRGANVGNMRDFENEFNVRNLIKLEQNYRSHGHILDAANQLIANNARR
LGKNLRTDAGHGEPVRVYEAATDTQEAGWIVEEIRALINTGHARSEVAVLYRSNAQSRTI
EHTLVNAGIPYRVYGGLRFFERQEIKHALAYLRLIDNPNDDTSFARVVNFPTRGIGARSI
EQAADAARQYNCSMAAAIVYVAGKAGSSLSAFATLIAKMRAETQQMSLPETVEYVVRASG
LADFYQNEREGQDRLENLQELVNAAAAFVSEAGYGLDTPARSIPLRPGATAPPELEAQGD
SVVVLDAVDVTDPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLEFT
AVFITGLEEGLFPHENSAIEADGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRYNI
RSRFFDELPQDTLKWLTPKVEAGSRWGGRSDNAGYGRDWFGRSDRQSEYSDPAVTAPLPA
FANAQRAAESGFRIGQPVFHTKFGEGTITALEGGGPDARAQVKFKRHGEKWLALAVAKLQ
AVE
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatctgctcgccaatctgaatcctgaacaacacgccgccgtcacgttacccaac
gaaccggccctcattctggcaggggccggcagcggcaagacacgggtactgattacccgg
atcgcgtggctgatccagcagggttacgcctcgccgatgaccatcctcgccgtcacgttc
acgaacaaggccgcgcgcgagatgatgtcgcgcctgtcggcgctgctgccgatcgatacg
cgcggcatgtggattggcaccttccacggcctgtgcaaccgcatgctgcgcgcacactat
cgcgacgcggcgctgccgtcgacgttccagattctcgatacggccgatcagctctcggcg
atcaagcgcctgatgaaaggcctcaatatcgacgacgaaaaatatccgccgaaaaacctg
cagtacttcatcaacaacgcgaaagagcaggggctgcggccgaaagatgtcgatgccacc
gacaacttcaaccgcaagtttgtcgagctgtacgaggcctacgaccagcagtgccagcgc
gaaggcgtggtcgatttccccgaactgctgctgcgctgttacgaactgcttgcgcacaat
ccaccgctgcgcgcgcactaccaggcgcgctttaagcacatcctcgtcgacgagttccag
gacaccaacaagctgcagtacgcgtggctcaagatgctggccggcgagagcaacgcgatc
ttcgcagtcggcgacgatgaccagtcgatctatgcgtttcgcggcgcgaacgtcggcaac
atgcgcgacttcgaaaacgagttcaacgtccgcaacctgatcaagctcgaacagaattac
cgctcgcacggccacattctcgatgcggcaaaccagttgatcgcgaacaacgcgcggcgc
ctgggcaagaatctgcgcaccgacgccggacacggcgaaccggtgcgcgtctacgaagcc
gccaccgatacgcaggaggccggctggatcgtcgaggagatccgtgcgctgatcaacaca
gggcacgcgcgtagcgaagtcgcggtgctgtaccggagcaatgcgcagtcgcgcacgatc
gagcacacgctcgtcaacgcaggcattccgtatcgcgtgtacggcggcttgcgctttttc
gagcggcaggaaatcaagcatgcactcgcgtatctgcggctgatcgacaatcccaacgac
gatacctcgttcgctcgcgtcgtcaatttcccgacgcgcggcatcggtgcgcgctcgatc
gaacaggcggcggatgctgcgcgccagtacaactgctcgatggcggcggcgatcgtgtat
gtggcgggcaaggccggctcgagcctcagcgcgtttgccacgctgatcgcgaagatgcgc
gccgaaacgcagcagatgagtctgccggaaaccgtcgagtacgtggtgcgcgcaagcggc
ctcgccgatttctaccagaacgaacgcgaaggtcaggaccgtctcgagaacttgcaggaa
ctggtcaatgccgcggcagcgtttgtcagcgaagcgggctacgggctcgataccccggct
cgttcgattccgctgcgccctggtgcgaccgcgccgcccgaactcgaagcgcagggtgac
agcgtggtggtgctcgacgctgtggacgtgaccgaccccgcgcagaatcccgacacgatg
acaccgctggccgggttcctctcgcatgcgtcgctcgaagccggcgacaaccaggcgcag
gcgggccaggacgccgtgcagttgatgacagtgcacgcggcgaagggactcgaatttacg
gcggtgttcatcactggccttgaagaggggctgtttccgcacgagaacagcgcgatcgaa
gcggacgggctcgaagaagagcgccgtctgatgtatgtggcgatcacgcgggcgaaggag
cggctgtatctgtcgtttgcgcagagccggatgctgcatggccagacgcgctacaacatt
cgctcgcggtttttcgatgaactgccgcaggacacgttgaagtggctcacgccgaaggtc
gaggccggttcgcgttggggcggtcggtccgacaatgccggttacgggcgcgactggttt
ggccgatccgatcgtcagagcgaatattcggacccggcggttaccgcgccgttgccggct
ttcgcgaacgcgcagcgtgccgccgaaagtggctttcgcatcggtcagccggtgttccat
acgaagttcggcgaaggcacgatcacggcgctcgaaggcggcggtccggatgcgcgggct
caggtgaaattcaagcggcacggtgagaagtggcttgcgctggcggtcgcgaaactgcag
gcggtcgaatga
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